KEGG   Methanobacterium sp. MB1: MBMB1_0472
Entry
MBMB1_0472        CDS       T02957                                 
Symbol
hsdR
Name
(GenBank) Type-1 restriction enzyme R protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
meth  Methanobacterium sp. MB1
Brite
KEGG Orthology (KO) [BR:meth00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:meth02048]
    MBMB1_0472 (hsdR)
Enzymes [BR:meth01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     MBMB1_0472 (hsdR)
Prokaryotic defense system [BR:meth02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   MBMB1_0472 (hsdR)
SSDB
Motif
Pfam: EcoR124_C SWI2_SNF2 T1R_D3-like HSDR_N ResIII DEAD DUF3471 DDT
Other DBs
NCBI-ProteinID: CDG64582
UniProt: U6EBI4
LinkDB
Position
complement(462800..465502)
AA seq 900 aa
MATQSEAALEKCLIDKLIEGGYERVKIRDENDLKINLKTQIERFNKIELSDDEFHKILLH
LESGTIFDKAKKLRDKYALKREDELIYIDFFNTKDWCKNIFQVTNQVTMKKTYENRYDVT
ILINGLPLVQIELKKRGAELKVAFNQIERYRHHSYRGLFQYIQIFVISNGVNSKYFANNK
DLSFKYTFSWKDKENRNVSSLNEFADTFLERCHLSKMIARYTVLNETSKSLMVLRAYQYY
AVEAILDKALNTTTNGYVWHTTGSGKTLTSFKVSQILAEEPGIDKIIFVVDRKDLDYQTF
KEFNSFSQGSVDNTENTKNLVKQLLGPDKLIITTIQKLSRAVARHKAIEQVKNQKTILMF
DECHRSQFGKMHDVITSFFTNLQYFGFTGTPIFAINSVDGMTTKTLFQDRLHSYVIKDAI
RDENVLGFSVEYVGRYRNKATLDIEVEDIDRKELMESEDRMEKIVDYIIAHHDRKTYNRE
FNAIFAVSSIEVLTKYYEIFQRKVHDLNIAAIFSFDANEEIKGDEHSRDKLERYIQDYNE
MFGTNYSTDTFNEYYVDVSKRSKDKQIDILLVVNMFLTGFDSKLLNTLYVDKNLKYHGLL
QAYSRTNRVLNEKKKHGNIICFRNLKKATDESIRLYSDESASEFVLMKSYEDYAEDFNKV
LEFLMDVAPYVGYVDELPSEKEVAEFVKVFRELLRIHTRLTVFTEFTFDDLHISEQNFND
YLSKYLDIYEKYKQSTAPEKVSVLDDVDFEVELVRRDNINVSYILNLIKELDIDSPSFEK
DKEFILDTMERSHELRSKIDLIQQFIERTIPQIEDKDKIEYHFENYIDHEKKKAVNNLAD
EEKLDHDITKAIIAEYEFSGKIRNDAVKQSFEEKLGLKERRSKLQRIKDLIVELVDKFSW
NT seq 2703 nt   +upstreamnt  +downstreamnt
atggcaacacaaagtgaagcagccctggaaaaatgccttattgataaactaatagaaggc
ggctacgaaagggttaaaatcagggatgaaaatgacttaaagattaatttgaaaactcag
attgagaggttcaacaagattgaattatctgatgatgaattccataagatcctgcttcac
cttgaaagtggaactatttttgacaaggctaagaagttaagggataaatatgcccttaaa
agagaagatgaattaatttacattgatttttttaatactaaagactggtgcaagaacatc
ttccaggttactaaccaggtaactatgaagaagacctatgaaaaccgatacgatgttact
atccttattaacggccttccactggttcagatcgagttaaaaaagaggggtgctgaactc
aaagtagcattcaaccagatagaacgttaccgccaccactcataccgtggattattccag
tacattcagatatttgtgattagtaatggagtaaattccaaatattttgccaataacaaa
gatttaagttttaaatacactttttcatggaaggataaagaaaacaggaatgtttccagt
ttaaacgaatttgcagacacgttcctagaaagatgtcatttatccaaaatgatagctaga
tacacagtcttaaatgagaccagcaaatctctgatggttttaagggcttatcagtattat
gctgtggaggccatcctggataaagctctaaacaccaccactaatggttatgtatggcac
accacaggcagtggaaaaactctgacctcctttaaagtcagccagatcctggcagaggaa
cctggtattgataagattatttttgtcgtggacaggaaagacttggactaccaaaccttt
aaagaattcaacagcttcagccagggatcggtagataacacagagaacactaaaaacctg
gtaaagcagcttttagggccagataaactaatcataaccactatccagaaattatcccgt
gcagtggccagacataaagccatagaacaagtcaaaaatcagaagactatcctaatgttt
gatgaatgtcaccgtagccagtttgggaagatgcatgatgtgataaccagcttcttcacc
aacctgcaatacttcggattcaccggaacacccatcttcgccataaactccgtggacggc
atgaccactaaaacattattccaggaccggctgcacagctatgtgattaaagacgccata
agagatgaaaatgtcctagggttttctgtggaatacgtgggacgctacaggaacaaggcc
acccttgacattgaagtggaggacattgacaggaaggaactcatggaatcagaggaccgg
atggaaaaaatcgttgattacatcatagcccatcatgatcgtaagacctataatcgggag
tttaatgccatatttgcagttagttccattgaagttttaaccaaatattatgagattttt
cagaggaaggttcatgacttgaatattgctgctattttctcatttgatgctaatgaggag
attaaaggtgatgaacattctcgtgacaagctggaaaggtacatccaggactataatgag
atgtttggcaccaattactcgacagacactttcaatgagtattatgtggatgtgtccaaa
aggtccaaggacaaacagatagacatcctattagtggtgaacatgttcctcaccggtttt
gatagtaaactccttaacacactgtatgtggataaaaatctcaagtatcatggactcctg
caagcctattcacgtactaaccgggtcttaaatgagaagaagaaacatggaaacatcatc
tgtttcaggaacttgaaaaaagccacagatgaatctataagattgtattctgatgaaagt
gcctcagaattcgtgttaatgaaatcctatgaagattatgcggaagatttcaacaaagtg
ttagagtttttaatggatgttgccccttatgtgggttatgttgatgagttaccttctgag
aaggaggttgctgaatttgttaaggtttttagggaattactgcggattcacaccaggtta
actgtgtttactgagttcacctttgatgatctgcacatttctgaacagaattttaatgat
tatctgagcaaatacttggatatctatgaaaaatataaacagagcactgctcctgaaaag
gtgtcagtcctggatgatgtggactttgaagtggaactggtccgcagggacaacataaac
gtgtcctacatcctgaacctgatcaaagaactggatattgacagcccatcattcgaaaaa
gacaaagaattcatcctggacactatggaaagaagccatgaactacgaagcaagattgac
ttaatacaacagttcatagaacgcaccatacctcagattgaggataaggataaaattgaa
taccactttgaaaactacatagatcatgagaagaaaaaagcagttaataatttagcagat
gaagaaaaactggaccatgatataaccaaagctataatcgctgagtacgaattttcaggt
aaaatcagaaatgacgccgtgaaacaatcatttgaagaaaaattaggactcaaggaaaga
agatccaaactgcaaaggattaaggatttgattgtggaactggttgataaattcagctgg
taa

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