Methanobacterium sp. MB1: MBMB1_0616
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Entry
MBMB1_0616 CDS
T02957
Name
(GenBank) phosphoesterase DHHA1
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
meth
Methanobacterium sp. MB1
Pathway
meth03410
Base excision repair
meth03430
Mismatch repair
meth03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MBMB1_0616
03430 Mismatch repair
MBMB1_0616
03440 Homologous recombination
MBMB1_0616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meth03400
]
MBMB1_0616
DNA repair and recombination proteins [BR:
meth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MBMB1_0616
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MBMB1_0616
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MBMB1_0616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
CDG64723
UniProt:
U6ECG1
LinkDB
All DBs
Position
complement(595992..597395)
Genome browser
AA seq
467 aa
AA seq
DB search
MAVNMKELDKSMAKANEMIRKAEDIKIYSHIDCDGISAGAILSTTLDRLEIDHEIEFISL
DRIPKLENENELTIFSDLGSGQDLDHFITSQSKVLILDHHPPLRKISTAGNGFLEVNPHH
YGLDGSHDISGGGMCYLLARTFGFNDLSWIGVLSAIGDMQNNLTGKLVGLNKEILDDGRD
LNLVESENDLAIYGRQTRPLFVALSYFGDVKLPITNNRNESIQFLKNLDIPINNGKKQRT
LYDLSPEEKGRIFSELVRMLSREVPPRYVRYIPRLVACDAYEFLKEEKYSPLRDASEFST
AINACSRHQNPEVALKVLKGDRGMALDEMEAQGKEHRRYLAEKMNWIQEEDRIQNMTHLQ
YFQGNGIKSEVVGTIAGMILSYGDWKKPMIGFTQINDENEGLKVSLRCSRLLAFDGIHFG
HIISKVAAKVGGSGGGHSVACGAYIPADKQDKFLELFNQQLKGVLLT
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcagttaacatgaaagaactggataaatcaatggctaaagccaatgaaatgatcaga
aaggcagaagatattaaaatatacagtcatatagactgtgatggaatatctgctggagcc
atactatctacaaccctggaccgtctggagatagatcatgaaatagagttcataagcctt
gaccggattcccaaactggaaaatgaaaatgagctcaccatattctcagacctaggttca
ggacaagatttagaccatttcattacatcacaatccaaagttctaattctggaccaccac
cccccactgcgaaagatatcaacagcgggaaatgggtttctggaagtgaacccccaccat
tatggtctggatggttctcatgatatttccgggggaggtatgtgttacctcctggccaga
acattcggttttaatgatctaagttggataggtgttttaagtgccattggagatatgcag
aacaatttaaccgggaagttagtgggacttaacaaagaaatactagatgatggaagggat
ctgaacctggtggagtcagaaaatgatctggccatttacgggcgccaaacccggccactt
tttgtggctttatcctattttggtgatgttaaactacccatcaccaacaaccgcaatgaa
tccatccagttcttaaagaacttagacatacccattaataatgggaaaaaacagcggaca
ctttacgatttaagcccggaagaaaagggaaggatcttctcggagttggtgcgtatgtta
agtcgtgaagtgccccctcgttatgttcgttacattcctcgcctggtggcttgcgatgcc
tacgaattcttaaaagaggaaaaatattcccccttacgtgatgccagtgaattttcaact
gccattaatgcctgcagccgacaccagaatccagaagtggccttgaaggttcttaagggt
gatcgaggtatggctctggatgagatggaagcacaggggaaggagcatcgtcgttatttg
gccgaaaaaatgaactggatccaggaggaagaccggatccagaacatgacccacctgcag
tattttcagggaaacgggataaaaagtgaagtggtgggaaccatagcgggtatgatccta
agttacggtgactggaaaaaacccatgattggttttactcagataaacgatgaaaatgag
ggattaaaggtttctttacgttgctcccgtcttttggcatttgatggaattcactttggc
catattatcagcaaagtggcagcaaaggttgggggaagtggtggtggccattctgtagcc
tgtggagcctacatccccgcagataaacaggacaaatttctggaacttttcaaccaacaa
ctgaagggtgttctgctaacttaa
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