Methanobacterium sp. MB1: MBMB1_0796
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Entry
MBMB1_0796 CDS
T02957
Symbol
truB
Name
(GenBank) putative tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
meth
Methanobacterium sp. MB1
Brite
KEGG Orthology (KO) [BR:
meth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meth03016
]
MBMB1_0796 (truB)
Enzymes [BR:
meth01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MBMB1_0796 (truB)
Transfer RNA biogenesis [BR:
meth03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MBMB1_0796 (truB)
Prokaryotic type
MBMB1_0796 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
DUF2202
Linocin_M18
Motif
Other DBs
NCBI-ProteinID:
CDG64900
UniProt:
U6EAM6
LinkDB
All DBs
Position
763482..764444
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AA seq
320 aa
AA seq
DB search
MAELLQKAYGETDPQYGSIPEERPLKEYLSKGIINLDKPSGPTSHEIDAWVKRILKLDKT
GHGGTLDPRVTGVLPIGLDTATRAIQLLLEAPKEYVCLMRLHEDVGEAKIRNILEAFTGK
IFQTPPLRSAVKRELRVRTIYYVNILEIDGQDALFRIGCEAGTYIRKYCHDIGEALGVGA
HMAELRRTRVGDFQEDNTLKTLQDVTDAYHYWIEDGDETSLRDCVQPMEMAASHLKKIVV
RDSAIDAVCHGADLAAGGILQLSEGIKRKDTLAIMTLKGELVAAGEALATTTEIAQADKG
IMVNIKKVFMEPGTYPKMWK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcagaactcctccagaaagcttacggggaaacagatccccaatacggatcgattcct
gaagaacgaccacttaaggagtacctgtccaagggtatcataaacctggataaaccctca
ggacccacatcccatgaaatcgatgcctgggtcaaaagaatccttaaactggataaaact
ggtcacggtggaaccctggatcccagggtcaccggtgtacttcccataggactggacacc
gccacccgagccatacaattactcctggaagcacccaaggaatatgtgtgtctgatgcgc
ctccacgaagatgtgggtgaagcaaagatacgaaacattctagaggcatttactggtaaa
atcttccagacaccacccctgcgatcagcagttaaaagggaactacgtgtacggaccatc
tactatgtaaacatattggaaatagatggccaggatgcactgtttcgtattggctgtgaa
gccggaacctacatccgtaagtactgccatgatattggtgaggcactgggagtaggagcc
cacatggctgaactacgccgtacaagggtgggtgactttcaggaagataacacccttaaa
acattacaggatgtcaccgatgcctaccattactggatagaagatggggatgaaacatcc
ctcagggactgtgtgcagcccatggaaatggccgccagccaccttaaaaagatagtggta
cgggattctgccatagatgccgtgtgtcatggtgcagatctagcggcaggtggaatacta
caactcagtgaaggaattaaacgcaaagatacactggccataatgacactcaagggtgaa
ctggtagctgctggggaggctctggccaccaccacagaaattgcccaggcagataaaggc
atcatggtcaacataaaaaaggtttttatggaaccaggaacataccctaagatgtggaag
tag
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