Methanobacterium sp. MB1: MBMB1_1021
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Entry
MBMB1_1021 CDS
T02957
Name
(GenBank) ATP-dependent RNA helicase, DEAD/DEAH box family
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
meth
Methanobacterium sp. MB1
Brite
KEGG Orthology (KO) [BR:
meth00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
MBMB1_1021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
TPR_2
TPR_1
TPR_11
TPR_8
Helicase_C
TPR_14
TPR_CcmH_CycH
ANAPC3
TPR_12
ResIII
WHD_HRQ1
TPR_15
TPR_19
TPR_17
TPR_9
ARM_TT21_C
TPR_16
ARM_TT21_2nd
TPR_20
Ribonuc_2-5A
Zein-binding
Motif
Other DBs
NCBI-ProteinID:
CDG65122
UniProt:
U6ED09
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All DBs
Position
987882..990698
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AA seq
938 aa
AA seq
DB search
MLQKVLDALENNRSFSRKVEHIETLNARQAKYGEVKDLPQSIQKYLQDSRIRLYQHQVDA
TELIREGENVLITTPTASGKTLAFNLPIMETLSRDENATALYIYPAKALANDQLSVLKHL
ESSCGLDFKPSIYDGDTPKNIRPWIKENSRLILTNPYMLHLILGWHHQWSRFYRNLKYVV
IDEAHHYRGVFGSNVAFLIRRLRRICNHYGSYPQFILSSATLANPQEFSQNLVGKTFPEV
NHDTSPSGKKHFILYNPFARWGDLSTHQETKNLFQLMVLNDLQTLCFTVSRKMAEIIAMW
TKKELNEIKPDLVNRITAYRSGYLAEERRKIEKGLKTGSLVGVTCTNALELGVDLGSLDG
VIISGYPGTMISTWQQAGRAGRAENESLVVMVAFENALDQYLMKHPEFLFHKSHENAVID
LQNQKIANGHLLCAIKELPLTVDDFEKYFEADYDTLEDIRQMGLVQETGQGLTYVGRKDP
AMEISLDQISSDHFRVYHNKRLMETMDRQHAYSEAHEGAVLINQGETYIVDKFNLQKRTI
NVKKMDVDYHTQALRNVEVTIEKELNSRKIGNFSVSFGEVKVTQDFYKYKEMLYGKTLAT
HELDLPPLKYHTRGLWFTIPGIVADALENIFPKKDSYAGSLHGAEHALISMFPLLVLCDR
FDIGGLSTNYHPQTRKATIFIYDAYEGGIGLAEKAVEVMEKLVEVTRDMVKSCQCRKGCP
TCIYSPKCGNDNKPLHKSGTIFLLESIMKMMRGEEMDLASQLVVDHAQSSSSPLKASMMG
GEGYQEFENPHNLVQKGESFYLNGNYNEALDCFQKALNMDENLLTAWKYQGMIEQQMDHQ
REALKSLKRALKIEPDNPETIYYLALSLHEIGNYKECQDLAEKLTRLRGDWDDAWCVLGM
VQQALGEDEKAIKAYHNALKINPLNEEARDNLKELLED
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgttacaaaaagtcctcgatgcactggaaaataaccgcagtttcagtcggaaggttgaa
cacatcgaaaccctcaatgcccgccaggcaaagtatggtgaagtgaaagatcttcctcaa
tccatccagaagtacctgcaggacagccgtattcgactctaccagcaccaggttgatgcc
acagagctcatcagggagggagaaaatgttctcataaccactcccactgcttctggtaaa
actctggcctttaacctgcctattatggaaactttaagccgtgacgagaatgcaacggcc
ctttatatatacccggccaaggcactggccaatgaccagctcagtgtactaaaacacttg
gaatcatcctgtggactggactttaaacctagtatctatgatggtgacactccaaaaaat
atccgcccctggatcaaggaaaattcacgtctaattttaaccaacccttacatgttacat
cttatactgggctggcatcatcagtggagtcgtttttaccgcaacctcaagtacgtggtt
attgacgaggcccaccactaccggggtgttttcggctccaacgtggcctttttaatccga
cgcttaaggcgaatatgtaaccattatggtagttacccccagtttattctctcctctgct
accctggctaatccccaggagttcagtcagaacctggtgggtaaaaccttcccggaggtt
aaccatgacacttctcccagtgggaagaagcatttcatcttatacaacccctttgcccgg
tggggtgatctttccacccaccaggaaaccaagaacctcttccagctcatggtgctaaat
gatctgcagaccctgtgttttacagttagccggaagatggccgagatcattgccatgtgg
actaaaaaagagttaaatgaaatcaaacccgaccttgttaaccgtataactgcttatcga
tctggatatctggctgaagaaaggaggaaaatagagaagggactgaagactggatccttg
gtgggtgtgacctgtaccaatgccctggagcttggtgtggatctgggtagtcttgacggg
gtgattatcagtggttacccgggaaccatgatcagcacctggcagcaagcaggacgagca
ggacgagctgaaaatgagtctttggtggtgatggtggcctttgaaaacgccctggaccag
tacctcatgaagcacccggaattcctcttccataaatcccatgaaaacgcggtaatcgac
ctccagaaccaaaagatagccaatggacacctattatgtgccataaaagagttaccatta
actgtggatgactttgaaaaatacttcgaggcagactacgataccctagaagatatacgc
cagatgggcctggtacaggaaactggccagggattaacctatgtgggacggaaggaccct
gccatggaaatcagcctggaccagatatccagtgaccacttccgcgtctaccataacaaa
cgtttaatggagaccatggaccggcagcacgcctacagtgaggcccatgaaggggctgtg
ctcataaatcagggggaaacctacatcgttgataagttcaacctccaaaagcgtaccatc
aatgtcaagaagatggacgtagattaccatacccaggcccttagaaatgtagaagtaacc
attgaaaaagagctaaattcccggaaaattggtaacttttctgtctcctttggagaagtg
aaggtaacccaggacttctacaagtacaaggagatgctctacggtaaaaccctggccacc
catgaactggacttaccaccattaaagtaccacacccgtggcctgtggttcaccataccc
ggaatagtggctgatgccctggagaacatcttccctaagaaggattcatatgctggtagc
ctgcacggtgcagaacacgcccttatctccatgttccctcttttagttttatgtgaccgg
tttgatataggtggattatccaccaattaccacccacaaaccaggaaagccaccatattc
atttatgatgcctatgaaggaggtattggactggctgagaaagccgtcgaagtcatggaa
aaactggtggaggttacccgtgatatggtgaaaagctgccagtgccgtaaaggatgcccc
acctgcatctactcccctaaatgtggtaacgataacaaacccctccataaaagtgggacc
atattccttttagagtctataatgaagatgatgagaggtgaagagatggatttagcctcg
caattggtagttgatcatgcccaaagttccagttcacctttaaaagcatcgatgatggga
ggtgaaggttatcaggaatttgaaaatccacataatctagtgcagaagggggagtcattt
taccttaatggtaactacaatgaggcccttgattgtttccagaaggcccttaatatggat
gagaatctacttacagcctggaagtaccagggtatgatagaacaacaaatggaccatcag
agggaagcattaaaatcattaaaaagagctctaaaaatagaacctgataacccggaaact
atttattacctggcactttctctccatgaaattggtaattataaagaatgccaggatctt
gcagagaaactcaccagattacggggtgactgggatgatgcctggtgtgttctgggtatg
gtccaacaggcccttggtgaggatgaaaaagccatcaaggcttaccataatgctcttaag
atcaaccccctaaatgaggaagcccgagataatttaaaggaattattggaagactag
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