Methanobacterium sp. MB1: MBMB1_1196
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Entry
MBMB1_1196 CDS
T02957
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
meth
Methanobacterium sp. MB1
Pathway
meth03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
meth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MBMB1_1196 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meth03400
]
MBMB1_1196 (uvrB)
DNA repair and recombination proteins [BR:
meth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MBMB1_1196 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MBMB1_1196 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_22
AAA
AAA_30
HEM4
DUF87
Motif
Other DBs
NCBI-ProteinID:
CDG65296
UniProt:
U6EAV8
LinkDB
All DBs
Position
1172858..1174816
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AA seq
652 aa
AA seq
DB search
MRKFELVSNYKPLGDQPKAIQSLSHGIKEGMKHQTLLGVTGSGKTFTIANVINEVQKPTL
VISHNKTLAAQLYEEFKELFPNNAVEYFVSYYDYYQPEAYVPQSDTYIDKEASINEEIDM
MRHSTTQSLLSREDVIVVSSVSCIYGIGAPEDYGNLVLQLEMGQQVEREEILAKLVEMQY
ERNDIDFSRGKFRVRGDVIEIFPAQGKTAIRVELFGDEVDGLSFIDHVTGQMRRQMDKIV
VFPAKHFVTSSEKMDKAIKGIEEELEDRLRVLEAENKLVEAQRLEQRTKFDIEMLKEMGY
CQGIENYSMHISGRKWGETPYSLLRYFPDDYLTIIDESHVTVPQIRGMYAGDRARKDVLV
DYGFRLPSARENRPLNFEEFESLQNQVIYVSATPGKYEISKSQQVVEQIIRPTGLVDPEI
IVKPVQGQVDHLLSKIQEKIQKNQRVLVTTLTKRMAEDLTDYYARAGIKVRYLHSEISTL
ERIDIIDDLRRGEFDCLVGVNLLREGLDLPEVGLVGILDADKEGFLRSEPSLIQTIGRAA
RNVDGQVVIYADKMTEAVRNAVDITNHRRKLQLKYNEDHGITPRSTVRTLKEKPEKKDVI
MRDDVEKMPKDELRLLIKDLKEEMKKAASRLDFEEAASIRDKILILEEASNK
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaatttgaacttgtatcaaattataaaccattaggggaccagcctaaagctatt
caatctttatcacacggaataaaagaaggaatgaaacatcaaacccttttaggcgttact
ggctctggtaagactttcaccattgccaatgtaatcaatgaagtacagaaaccaactcta
gtcatatcccacaataaaacactggctgctcaactctacgaggaatttaaagagctgttt
cctaacaatgccgtggaatactttgtcagttactacgattattaccagcccgaagcttat
gtgccccagagcgatacctacattgataaagaggcatccatcaatgaagagatcgatatg
atgaggcacagcaccacccagtccctccttagccgggaggatgttattgtggtttccagt
gtatcctgtatctatggtatcggtgcaccagaagactatggaaacctggtactgcaactg
gaaatggggcaacaggttgagagggaggaaatactggccaaactggttgaaatgcagtat
gaaaggaatgatattgacttcagccggggaaaattcagggtaaggggtgatgtgatagaa
atattccccgcccagggaaaaaccgccattagagtagaactttttggtgatgaagtagac
ggcctatccttcattgaccatgtaactggccagatgaggcgacaaatggataaaatagtg
gtcttccctgctaagcacttcgtaacctcgtccgaaaaaatggataaagccattaaagga
attgaagaagaattggaagataggttgcgtgttttggaagctgaaaataaattagtggaa
gctcaacgcctggagcaacgcactaaatttgacatagaaatgcttaaggaaatgggttac
tgtcaggggattgaaaactacagtatgcacatttcaggacgtaagtggggtgaaacaccc
tacagtctattgcgttacttccctgatgattacctgactatcattgatgaatcacacgtt
actgtaccccagatcagaggtatgtatgctggtgaccgggcacgtaaagatgttctggtt
gattatgggttccgactaccatcggcccgtgaaaaccggccactgaattttgaagaattt
gaaagcctacagaaccaagtgatctatgtatctgccaccccaggaaagtatgaaataagc
aagtcccagcaagtggtggaacagatcataaggcccactggactggtagacccggaaata
atagtcaaaccagtgcagggccaggtcgaccatttacttagcaagatccaggaaaaaatt
cagaaaaatcaacgagttctggtaaccaccctaaccaagcgcatggcagaagaccttact
gattactatgcccgagctggtatcaaggtaagatacctccactctgaaatcagcaccctg
gagagaattgacattatcgatgacctgcgccggggtgaatttgactgcctggtgggggta
aacctactccgtgaaggcctggaccttcccgaagtgggcctggtaggtatactagatgcg
gataaggaaggattccttcgctcagaaccatcactgatacagaccattggccgtgcagcc
cggaacgtggatggacaggtggttatctacgctgataaaatgacagaagctgtccgtaac
gctgttgatatcactaaccatagacggaaattgcagttgaaatacaatgaagatcatgga
ataactccccgcagcacagtacgcacccttaaagaaaaacccgagaaaaaagatgttata
atgcgtgatgatgtggaaaaaatgcccaaagacgaacttcgcctgcttataaaggatcta
aaagaagagatgaaaaaagcagccagtcgactggacttcgaagaggcagccagtatcaga
gacaaaatactgattttagaagaagcttccaataaatag
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