Methanobacterium sp. MB1: MBMB1_1956
Help
Entry
MBMB1_1956 CDS
T02957
Name
(GenBank) Replication factor-A domain-containing protein
KO
K07466
replication factor A1
Organism
meth
Methanobacterium sp. MB1
Pathway
meth03030
DNA replication
meth03420
Nucleotide excision repair
meth03430
Mismatch repair
meth03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MBMB1_1956
03420 Nucleotide excision repair
MBMB1_1956
03430 Mismatch repair
MBMB1_1956
03440 Homologous recombination
MBMB1_1956
03460 Fanconi anemia pathway
MBMB1_1956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
meth03000
]
MBMB1_1956
03032 DNA replication proteins [BR:
meth03032
]
MBMB1_1956
03400 DNA repair and recombination proteins [BR:
meth03400
]
MBMB1_1956
Transcription factors [BR:
meth03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
MBMB1_1956
DNA replication proteins [BR:
meth03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
MBMB1_1956
DNA repair and recombination proteins [BR:
meth03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
MBMB1_1956
MMR (mismatch excision repair)
MBMB1_1956
DSBR (double strand breaks repair)
HR (homologous recombination)
MBMB1_1956
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
Rep_fac-A_C
OB_Ssb-like
SHLD2_OB1
MlaD
HROB
OB_MEIOB_N
DUF5088
RecG_wedge
Zn_ribbon_6
DZR_2
Motif
Other DBs
NCBI-ProteinID:
CDG66031
LinkDB
All DBs
Position
1896048..1898423
Genome browser
AA seq
791 aa
AA seq
DB search
MRELNQEIMDEYEKIKDKISYEEFLKKMDEYKEENADVSFIDDISIAQMVVGNYITEKNE
PTQEVKDFWKIADLEPGTQHINLLGRVMSISNVKKFTSKKGREGKLANLILADETGRIRV
VFWTENIKLLDKIQEGDVVQINDVEVKQGFREDETHLNIRSSLEKLDPTEYPDLPPYNDK
ITPLSEVKGEEEVNVVGRIIRIPRIRSFDRNGREGKVASLELQDKSGTMQLTLWNKDTQI
IEDLELAEGDSIKVMGAQSRVRDGEVSLNHSWTGRIIKGDFDVPEYQENIIKIGDAHEMR
NVTILGLISKVYDTITFERDDGSVGKVKSLELEDDTGSIRVTLWNEDTDLAVKKMDILKI
IGGNIEFDDYSGTNYRVNTNWNSKLIVNPPIDNNLKLLLEEVGKYLKPVKIGDLNNIEED
GEEVDVVGRVVNLYEPNEFQRDDGSLGMVRTIEMADDTGMVRVSLWDNKAEHPLKEGDAI
KIENARIRLGDYQVDLSVGRTSLIITPSEEEINTLPSLTDMESMIYQTKKISELVEGDRE
VSLSGRILSISEPTQFTKSDGSSGLVRSIEIADESGVVRASLWDDQANAPLKEGEAIKIE
NPRVTLRNNNIELSVGRTTLINKISDEEASVPSLEEIERKLYPSKKIEDIEEGDQNIKVT
GEVVDIRGNKILFEMCPNCNKRVNWVDNAYICDICGEEIEKPNMLMIISLLLEDDTGTIS
ITFFRKAAEEVLGITTSEAEEIIATTGDEGSLEEKVGDLVGQHITVIADANFDEYNEEIR
LNARKTIDVKL
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgagggaacttaaccaagagataatggatgagtatgagaaaattaaggataaaatctca
tatgaagaatttctaaaaaaaatggatgaatacaaggaagaaaatgcagatgtaagtttt
attgatgatattagcatagcccaaatggtagtagggaattacattaccgaaaaaaacgaa
cccacccaagaagtaaaggacttctggaaaattgcggatttagaacctggcacccaacat
ataaatctactgggccgagtaatgagtatttccaatgttaaaaaattcaccagcaaaaaa
ggaagagaaggaaaattagccaacctaatcctggccgatgaaaccgggagaataagagtg
gtattctggactgaaaacatcaaattgttggataaaatccaggaaggagatgtggtgcag
atcaatgatgtggaagtgaaacaaggattccgtgaagatgaaacccacctcaacatacgt
tcatccctggaaaaattggatcccacagaatatcctgatttacctccatataatgataaa
ataacccctttaagcgaagttaaaggagaagaagaggtgaatgtggtgggtcgtatcatt
cgcatccccaggataagatcatttgaccgcaatggaagagagggtaaagtggcctcactg
gaactgcaagataaaagtggcaccatgcagttaaccctgtggaacaaggacacccagatc
atcgaagatctggaactggctgaaggagattccattaaggttatgggggctcaaagtaga
gttcgagatggagaagtatccttaaatcattcttggactggtaggataatcaaaggagac
tttgacgttccagaatatcaggaaaatattatcaaaataggcgatgcccatgaaatgagg
aatgtcaccattttaggactgattagtaaagtttacgacactataaccttcgaaagagac
gatggaagtgtagggaaagtgaagtcattggagttggaagatgatactggttctatacgg
gttaccctatggaacgaggacactgacctagctgtgaagaagatggacatcctcaaaatc
atcggaggaaacattgaatttgatgattattctggaaccaactaccgggttaacaccaac
tggaatagtaaactaatagtcaacccccctattgacaataatttaaagcttctcctggaa
gaagtgggaaaatacctgaaaccagtgaaaattggggatctaaacaacattgaagaagat
ggagaagaagtagatgttgttggacgggtggtaaacctttatgaacctaacgaattccag
agagacgatggaagtctgggaatggtgagaaccattgaaatggccgatgatacaggaatg
gtaagagtttccctgtgggataacaaagcagaacacccgctaaaagagggagatgcaatt
aaaattgaaaatgcccgtatccgtctaggggattaccaagtagaccttagtgtagggcgg
acctccctaattattaccccttccgaagaggagatcaacacacttccttctcttactgat
atggaatcaatgatctaccagaccaaaaagatcagtgaactggtagaaggtgaccgtgaa
gtgagcctctctggccggattttaagcataagcgaacctacacaattcaccaaaagtgat
ggtagttctggtttagtacgttccatagagatagctgatgaaagtggagttgtacgagct
tctctctgggatgaccaggccaacgcaccccttaaagaaggtgaagccataaaaatcgaa
aatcctcgagttaccttaagaaacaataacatagaactcagtgtaggtcgaacaaccctt
ataaacaaaatcagcgatgaagaagcatcagtgcccagcctagaggagatagaaagaaaa
ttatacccctccaaaaagatcgaagatattgaagaaggggatcagaacatcaaagtaact
ggagaagtagttgatatccgcggtaataaaatactctttgaaatgtgccctaactgtaat
aaaagagttaactgggttgacaatgcttatatctgtgacatatgtggagaagaaattgaa
aaacccaatatgctaatgatcatcagtttattactggaagatgacactggaaccataagc
atcacctttttccgtaaggctgccgaggaagttttaggcataaccacctctgaagccgaa
gagatcattgccaccactggagacgaaggatcactagaagaaaaggtgggtgacctggtg
ggccagcacatcacagtgatcgccgatgccaacttcgatgaatacaatgaagaaatacgt
ttaaacgccaggaaaacgatagatgttaaactttaa
DBGET
integrated database retrieval system
