Methanobacterium sp. MB1: MBMB1_2038
Help
Entry
MBMB1_2038 CDS
T02957
Name
(GenBank) phosphoesterase RecJ domain-containing protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
meth
Methanobacterium sp. MB1
Pathway
meth03410
Base excision repair
meth03430
Mismatch repair
meth03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MBMB1_2038
03430 Mismatch repair
MBMB1_2038
03440 Homologous recombination
MBMB1_2038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meth03400
]
MBMB1_2038
DNA repair and recombination proteins [BR:
meth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MBMB1_2038
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MBMB1_2038
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MBMB1_2038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
DHH_CID
Motif
Other DBs
NCBI-ProteinID:
CDG66112
LinkDB
All DBs
Position
complement(1991935..1993296)
Genome browser
AA seq
453 aa
AA seq
DB search
MTHKKQHYLLNRAEEANVLLKEHLDQDHVVRVISHNDSDGISAAGVICNAITQEGGKFHV
TLLPRLQDKVLNRLSQEKYKLFFFCDMGSSYVERIGKLNGQAIIADHHQTMDNTGDDEET
VVHVNPHLFDLDGTRDVSASGVTYLTVKSFNRYELVGLALVGAFGDMQYVNGFTGVNETI
LSEAIEAGVVEEHEDLKISSKTEPLYKALAHTFKPALPGISGNLEKSQAFLEKIGISYGI
KFTDLANEEKDFLTEHLTRINPQIFDTVYSMPQENPALRNLEQYAEILDACGKNKKYSVG
LSICLGERDSAIAQGVEYLSKYQKSLIKGIRWISREGSQEMDHVQYLYTEDKNNKKIMGT
LASLGIELEILNPQKPVITLSRMHKDVKVSGRTTLEMTQNGVNLGFALEQAAKSFNGAGG
GHNIAAGAMVPYKELENFKNLVNDIVGSQVNSS
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgacccacaaaaagcagcactacttgttaaatagagctgaagaagcaaatgtgctcctg
aaagagcacttggatcaggatcatgtggtgagagtgatctcccacaatgattctgatggt
atatcagcagctggtgttatctgtaacgccattacccaggaaggggggaagttccatgta
actttgttaccccgtcttcaggataaagtcctgaacaggctttcccaggagaaatataaa
ctcttctttttctgtgacatggggagtagttatgtggagaggataggcaaactcaatggc
caggccatcatcgccgaccaccaccagaccatggacaatactggagatgatgaggagact
gtggtgcatgttaacccccatctgtttgatctggatgggacccgggatgttagtgcctct
ggagtaacctaccttactgtaaaatcttttaacagatatgaattagtagggctggcattg
gtaggtgcctttggtgatatgcagtatgttaatggttttactggtgtgaatgagaccatt
ttatctgaagccatcgaagctggggtggtggaagaacacgaagatcttaaaatatcatcg
aaaactgaacctctttacaaagccttggcccacacatttaaaccagctctccctgggatt
tcaggaaatctggaaaaaagtcaggccttcctggaaaaaattggaatatcctatggtatt
aagttcactgacctggccaatgaggagaaggacttcctcactgaacacctgacccggatc
aatccacaaatattcgacacagtgtacagtatgcctcaggaaaatccagcactacgaaat
ctggaacaatacgctgaaatattagacgcttgtgggaaaaacaagaaatattctgtggga
ctgagtatatgtctaggtgaaagggattcagccattgcccaaggagtggaatatctgagc
aaatatcagaaatccttaattaaaggtatccgatggatctccagggaaggttcccaagaa
atggaccatgtacaatatctttacaccgaagataaaaacaataaaaagataatgggaaca
ttagcatcattagggattgaattagagatattaaatccccaaaaaccagtgataacccta
tctcgcatgcacaaagatgttaaagtatcgggacgtaccacattggaaatgacccaaaat
ggagtcaatttgggttttgctctagaacaagcagccaaaagttttaatggtgcaggtgga
gggcataacattgcagctggtgcaatggtaccctataaagagctagaaaactttaaaaat
ttggttaacgatattgtaggctcacaggtcaattcatcataa
DBGET
integrated database retrieval system
