Methylobacterium radiodurans: DK427_01010
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Entry
DK427_01010 CDS
T05919
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
meti
Methylobacterium radiodurans
Pathway
meti03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
meti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DK427_01010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meti03400
]
DK427_01010
Enzymes [BR:
meti01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DK427_01010
DNA repair and recombination proteins [BR:
meti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DK427_01010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
AWN34495
UniProt:
A0A2U8VLG7
LinkDB
All DBs
Position
241546..242976
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AA seq
476 aa
AA seq
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MAETARAVALAPGADLTGFRAAVRALVAEDVTPERVAWSEGAACDLFGSAPPAESAPLRL
PRAVADLVPMVVPHRDPERYALLYRLIWRVRAGERHLTEVPSDPLVHRLNLMRKAIGRDL
HKMHAFLRFRRSEEAGVERFTAWFEPDHHILEAAAPFFVERFRALRWTILTPDASAHWDG
ATLRLGPPGRREDLPPGDGFEAGWRGYYESTFNPARTNLKAMRAEMPKKYWRNMPETLAI
PALVRGAEAGTRAMIERSPSVPARRDPARAVAAMADQDPTSLEELNAIIRRSEPLVPGAT
QAVLGEGPVGATIAFVGEQPGDQEDRQGRPFVGPAGQLLSRAMAEAGIDRGASYLTNAVK
HFKFEERGKRRIHQKPTAGEVSHYRWWLDRELEFVAPRLVVALGATAVLALTGKAVPITR
ARGPFQFERHHNRFVGFITVHPSYLLRLPDEAKAEAYGAFVGDLRRVAELERELAG
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcggagacggcgcgcgccgtggccctcgcgcccggcgcggacctcaccggcttccgc
gccgccgtccgcgccctcgtagctgaagacgtgacgcccgagcgcgtcgcctggagcgag
ggcgcggcctgcgacctgttcggcagcgcgccgcctgcggaatcagcccctttgcgcctg
ccccgcgcggtcgccgacctcgtgccgatggtggtgccgcaccgagatcctgagcgctac
gccctgctctaccggctgatctggcgggtgcgcgcgggcgagcgccacctcacggaggtg
ccgagcgatcctctggtccaccggctcaacctgatgcggaaggcgatcgggcgcgacctg
cacaagatgcacgccttcctgcgcttccgccggagcgaagaggcgggtgtcgagcgcttc
accgcgtggttcgagcccgaccaccacatcctcgaggccgcagcgcccttcttcgtggag
cgtttccgcgcgctccgctggaccatcctgacgccggacgcctccgcgcactgggacggc
gcgacgctccgcctcggcccaccgggccggcgcgaggacctgccccccggcgacgggttc
gaggccggctggcgcggctattacgagagcaccttcaacccggcccgcaccaacctgaag
gcgatgcgggccgagatgccgaagaagtactggcggaacatgccggagaccctggcgatt
ccagccctcgtgcggggggccgaggccggcacgcgcgccatgattgagaggagcccgagc
gtgcccgccagacgcgaccccgcccgcgccgtcgccgcgatggccgaccaggacccgacc
tcgctcgaggaactcaacgccatcatcaggcgcagcgagccgctggtgcccggcgcgacc
caagcggtactcggcgagggcccggtcggcgcgacgatcgcgtttgtgggcgagcagccg
ggcgaccaggaggaccggcaggggcgtcccttcgtcggtcccgccgggcagctcctctcg
cgcgcgatggcagaggccgggatcgaccggggggcgagctatctcacgaacgccgtcaag
cacttcaagttcgaggagcgcggcaagcgccgcatccaccagaagccgaccgccggcgag
gtcagccactatcgctggtggctcgaccgggaactggaattcgtcgcgccccgcctcgta
gtcgcgctcggggccaccgccgtgctggcgctgaccggcaaggcggtgccgatcactcgc
gcccgcgggccgttccagttcgagcgccaccacaaccgcttcgtgggcttcatcacggtt
cacccctcctacctgctgcgcctgccggacgaggcgaaggcggaggcctatggggcgttc
gtcggcgacctgcggcgggtggcggagctggagcgagaactggcgggctga
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