KEGG   Methylobacterium radiodurans: DK427_02310
Entry
DK427_02310       CDS       T05919                                 
Name
(GenBank) AAA family ATPase
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
meti  Methylobacterium radiodurans
Pathway
meti04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:meti00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    DK427_02310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:meti03019]
    DK427_02310
   03009 Ribosome biogenesis [BR:meti03009]
    DK427_02310
   04131 Membrane trafficking [BR:meti04131]
    DK427_02310
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:meti04147]
    DK427_02310
Messenger RNA biogenesis [BR:meti03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     DK427_02310
Ribosome biogenesis [BR:meti03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    DK427_02310
Membrane trafficking [BR:meti04131]
 SNARE
  SNARE associated proteins
   Others
    DK427_02310
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    DK427_02310
Exosome [BR:meti04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   DK427_02310
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_5 AAA_16 AAA_22 AAA_2 CDC48_2 AAA_33 AAA_14 TIP49 IstB_IS21 AAA_28 nSTAND3 ABC_tran AAA_18 NPHP3_N RNA_helicase AAA_3 AAA_30 Mg_chelatase AAA_19 DUF815 AAA_17 AAA_7 TsaE nSTAND_NTPase5 AAA_11 bpMoxR Zeta_toxin AAA_24 NB-ARC PhoH ATPase_2 CPT
Other DBs
NCBI-ProteinID: AWN38794
UniProt: A0A2U8VYF1
LinkDB
Position
521433..523703
AA seq 756 aa
MAETEAQTLRLQVANARPQDAGRGIARLGHAALAQLGLREGDVVEIVGKRHTAAIAVGPY
EEDEGLNLVRLDGLQRVNAGAASGDHVEIRAAPEIRPAGRVVVAPAQKNVRLQGSGEALR
RTLFRRPLVAGDVISTSTQSRAAPDPRIPPELRPYLEGPTYGLQEIRLVVVSTQPRGIVY
VAEGTEIELRPLFEEPKDGRRADVTYDDIGGLGDTVDQIREMVELPLRYPELFQRLGIDP
PKGVLLHGPPGTGKTRLARAVANETEARFFHIAGPEIMGSRYGESEQRLREVFQEAAQNA
PSIIFIDEIDSIAPKREQVTGEVERRIVAQLLTLMDGLEPRQNIVVIGATNRRDAIDEAL
RRPGRFDREIIIGVPDQPGRREILGIHTRGMPLAEDVDLDAVARTTYGFVGADLGALVRE
AAMDAVRRILPEVNLREGIPAEVLEELSVRRDDFLSALKRIQPSALREIMIQVPDVTWDD
VGGLAEAQMRLREGVELPLRSPQAFRRIGIRPAKGFLLFGPPGTGKTLLAKAVAREAEAN
FVATKSSDLLSKWYGESEQQVSRLFQRARQVAPTVIFIDEIDSLAPARGGGLGEPAVTER
VVNTILAEMDGLEELQGVVVMAATNRPNLLDPALLRPGRFDELVYVPVPDAAGRRRILAI
HTRNMPLGEDVDLDLIAERTARFTGADLEDLTRRAGLLALRESLEAATVGRAHFEQAARE
TRPSVTVEMERDYEEMLRTLKQEGPQRQPIGFLAPR
NT seq 2271 nt   +upstreamnt  +downstreamnt
atggccgagaccgaggcgcagaccctccggctgcaggtcgccaacgcgcgcccgcaggat
gcggggcgcggcatcgcccggctcggccacgcggccctggcgcagctcggcctacgggag
ggcgacgtcgtcgagatcgtcggcaagcgccacaccgcggcgatcgcggtcggcccctac
gaggaggacgaggggctgaacctcgtccgcctcgacggcctccagcgcgtcaatgccggc
gcggcgagcggcgaccatgtggagatccgcgccgcgcccgagatccggccggccggacgc
gtggtggtggcgccggcccagaagaacgtccggctccagggctcgggcgaggcgctgcgg
cgcaccctgttccgccggccgctggtggcgggcgacgtgatctcgacctcgacgcagtcg
cgcgcggcgcccgatccgcgcatcccgccggagctgcgcccctacctcgagggcccgacc
tacgggctgcaggagatccgcctcgtcgtggtctcgacgcagccgcgcggcatcgtctac
gtggccgagggcaccgagatcgagctgcgcccgctcttcgaggagccgaaggacgggcgg
cgtgccgacgtcacctacgacgatatcggcgggctcggcgacacggtcgaccagatccgc
gagatggtcgagctgccgctgcgctatcccgagctgttccagcggctgggcatcgacccg
ccgaagggcgtgctgctgcacggcccgccgggcaccggcaagacgcgactcgcccgcgcg
gtggccaacgagaccgaggcgcgcttcttccacatcgccggccccgagatcatgggcagc
cgctacggcgagtccgagcagcgcctgcgcgaggtcttccaggaggctgcccagaacgcg
ccctcgatcatcttcatcgacgagatcgactcgatcgccccgaagcgcgagcaggtcacc
ggcgaggtcgagcgccggatcgtggcccagctcctcacgctgatggatgggctggagccg
cgccagaacatcgtggtgatcggcgccaccaaccggcgcgacgcgatcgacgaggccctg
cgccgacccggccgcttcgaccgcgagatcatcatcggcgtgcccgaccaaccggggcgg
cgcgagatcctgggcatccacacccgcggcatgccgctcgccgaggacgtcgatctcgac
gcggtcgcgcgcaccacctacggcttcgtcggcgccgatctcggcgcgctggtgcgcgag
gccgcgatggatgcggtgcgccgcatcctgccggaggtgaacctgcgcgagggcatcccg
gccgaggttctggaggagttgagcgtccggcgcgacgacttcctgtcggcgctgaagcgc
atccagccctcggcgctgcgcgagatcatgatccaggtgccggacgtgacctgggacgac
gtgggcggcttggccgaggcgcagatgcgcctgcgcgagggcgtcgagctgcccctgcgc
tcgccgcaggccttccggcgcatcggcatccggccggccaagggcttcctgctcttcggg
ccgcccggcaccggcaagacgctgctcgccaaggcggtggcgcgggaggcggaggcgaac
ttcgtggcgacgaaatcctccgaccttctgtccaaatggtacggcgagtccgagcagcag
gtctcgcgcctgttccagcgggcgcgccaagtcgcgcccaccgtgatcttcatcgacgag
atcgacagcctcgcccctgcccgcggcggcggcctcggcgagcccgccgtgaccgagcgc
gtggtcaacacgatcctggccgagatggacgggctggaggaattgcagggcgtcgtggtg
atggcggcgaccaaccggccgaacctgctcgacccggccctgctgcgccccgggcgcttc
gatgagctcgtctacgtgccggtgccggacgcggctgggcgccgccggatcctggcgatc
cacacccggaacatgccgctcggcgaggacgtcgatctcgacctgatcgccgagcgcacc
gcccgcttcaccggcgcggatctcgaggacctcacccgccgcgccggcctcctggcgctg
cgggaatccctggaggcggcgacggtcggccgcgcccatttcgagcaggccgcccgcgag
acccggccctcggtgacggtcgagatggagcgggactacgaggagatgctgcgcaccctc
aagcaggagggcccgcagcgccagccgatcggcttcctggcgccgcggtga

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