Methylobacterium radiodurans: DK427_03220
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Entry
DK427_03220 CDS
T05919
Name
(GenBank) diguanylate phosphodiesterase
KO
K13593
cyclic-di-GMP phosphodiesterase, flagellum assembly factor TipF
Organism
meti
Methylobacterium radiodurans
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Gene cluster
GFIT
Motif
Pfam:
EAL
Ribosomal_60s
Motif
Other DBs
NCBI-ProteinID:
AWN34873
UniProt:
A0A2U8VMP5
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All DBs
Position
complement(732025..733446)
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AA seq
473 aa
AA seq
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MLRFLGRHASLLAFGVVAAVVLGPLTVFWPGAGALAVALVGAVGALAAHARATALRARCD
VLSREVDGLSKRLLRAEALAAARPEPEQAGLAAEISELGVEIGLLSGIVRDLTAVVGVQD
AEVARLKAAAARPPAVPAAPRPAPAVPQPIVPPPVRPVPAEPATRRPAPEPAPVPAPLPA
PAPAPARPLPPRTVLPRPEPLPEAALIAAFEEDGLEVHLQPVVTLPQRKVVAYEALARLR
AGTDLLAPEDFLPVLERHGRTTELDRRMLQRAATVARHLGSRGSEASVTYGLSPLSLYEP
GFLRWLARLVADDAGLAGRLVLALPQASWRSLDAEQAGALGALRGKVGFVLDRPQDLRFD
GAALARAGVGQVKIPAGMLLRPERPDLADIAVEDLVTALARAGIRLVAQSVEAEGDVPDL
IDLDVALAQGSVFAAPRPVRADVLAAPPAEAGPPEPPEPPQRRPFRSFLRRAS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgctccggttcctcggccggcatgcgagcctgttggccttcggggtggtggccgccgtc
gtcctcgggcccctcacggtgttctggccgggagccggggcgctggccgtcgccctcgtc
ggtgcagtcggagcgctcgccgcccacgcccgcgccaccgccctgcgggcgcgctgcgac
gtgctctcccgcgaggtcgacgggctctccaagcgcctgctgcgcgccgaggcgctcgcc
gccgcgcggcccgagccggagcaggcggggctggccgccgagatctcggaactcggcgtc
gagatcggcctgctcagcggcatcgtgcgcgacctcactgcagtcgtcggcgtccaggac
gcggaggtcgcccgcctgaaggccgcggctgcccgtccgccggccgtacccgccgcgccg
cgcccggcgcccgccgtcccgcagccgatcgtcccacccccggtccggcccgtgcccgcg
gagcccgcgacgcggcgtcccgcacccgagccggcccccgtgcctgcgcccctgccagcc
cctgcgcccgcgccggccaggcctcttccgccccgcacggtcctgccgcgtcccgagccg
ctgcccgaggccgcgctgatcgccgccttcgaggaggacgggctggaggtgcatctccag
cccgtcgtcaccctgccgcagcgcaaggtcgtcgcctacgaggcgctggcgcggttgcgc
gcgggcaccgacctcctcgcgcccgaggatttcctgccggtcctggagcggcacgggcgc
acgaccgaactcgatcgccgcatgctccagcgcgccgccaccgtcgcgcgccatctcggc
agtcgcggcagcgaggcgagcgtgacctacggcctctcgccgctctcgctctacgagccc
ggcttcctgcgctggctcgcccggctcgtcgccgacgatgccgggctcgccggccgcctc
gtgctcgccctgccgcaggcgagctggcgcagcctcgacgccgagcaggcgggcgcgctc
ggcgccttgcgcggcaaggtcggcttcgtcctcgaccggccgcaggacctgcgcttcgac
ggggcagccctcgcgcgcgccggcgtcgggcaggtcaagatcccggccgggatgctgctg
cggccggagcggccggacctcgccgacatcgccgtcgaggatctggtgacggcgctcgcc
agggccgggatccgcctcgtggcgcagtcggtcgaggcggagggcgacgtgcccgacctg
atcgacctcgacgtggcgctggcccagggctcggtcttcgcagcgccccgcccagtgcgg
gccgacgtgctcgccgcccccccggccgaggccggaccgccggagccgcccgagccgccg
cagcggcggcccttccgctccttcctgcgccgggcgagctga
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