Methylobacterium radiodurans: DK427_03795
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Entry
DK427_03795 CDS
T05919
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
meti
Methylobacterium radiodurans
Pathway
meti03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
meti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DK427_03795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meti03021
]
DK427_03795
03019 Messenger RNA biogenesis [BR:
meti03019
]
DK427_03795
Transcription machinery [BR:
meti03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DK427_03795
Messenger RNA biogenesis [BR:
meti03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DK427_03795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_22
NACHT
S1CSD-TOTE-2
AAA_25
AAA
ATPase_2
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AWN34975
UniProt:
A0A2U8VMR4
LinkDB
All DBs
Position
complement(846559..847911)
Genome browser
AA seq
450 aa
AA seq
DB search
MTAHPDAFADAPETEEPAAQAPVPAVLAGVKEVKLQDLKAKTPTDLIAFAEEVEVENAST
MRKQELMFAILKQLAAKEIEIIGSGTVEVLQDGFGFLRSSDSNYLPGPDDIYISPTQIRR
FGLRTGDTVEGPIRGPKDGERYFALLKVNTINFESPEKIKHKVHFDNLTPLFPTRRFKLE
LENPTKKDFSPRIIDIVAPIGKGQRALIVAPPRTGKTVLMQNIAQSITLNHPECYLIVLL
IDERPEEVTDMQRSVKGEVIASTFDEPATRHVQVAEMVIEKAKRLVEHGRDVVILLDSIT
RLGRAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLSIIATALIDTGSRMD
EVIFEEFKGTGNSEIILDRKVSDKRIFPAIDITRSGTRKEELLVPPDALKKTYVLRRILN
PMGVTDAIEFLLDKLRQTKSNGDFFDSMNT
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgactgcacatcccgacgctttcgccgacgcccccgagaccgaggagccggctgcccag
gcgcccgtcccggcggtgctcgccggcgtcaaggaggtcaagctccaggacctcaaggcc
aagacgccgaccgacctcatcgccttcgcggaggaggtcgaggtcgagaacgcctcgacc
atgcgcaagcaggagctgatgttcgccatcctgaagcagctcgctgccaaggagatcgag
atcatcggctccggcacggtcgaggtgctgcaggacggcttcggcttcctgcgctcctcc
gactcgaactacctgccgggcccggacgacatctacatctcgcccacccagatccgccgc
ttcggcctgcgcaccggcgacaccgtcgagggcccgatccgcggaccgaaggacggcgag
cgctacttcgcgctcctcaaggtcaacacgatcaatttcgagtcgcctgagaagatcaag
cacaaggtccacttcgacaacctgacgccgctcttccccacgcggcggttcaagctggag
ctggagaacccgaccaagaaggacttcagcccccgcatcatcgacatcgtcgcaccgatc
ggcaagggccagcgcgccctgatcgtggcgccgccccgcacgggtaagaccgtgctgatg
cagaacatcgcgcagtcgatcaccctcaaccaccccgagtgctacctcatcgtgctgctc
atcgacgagcgtcccgaggaggtcaccgacatgcagcgctcggtgaagggcgaggtcatc
gcctcgaccttcgacgagccggccacccgccatgtgcaggtcgccgagatggtgatcgag
aaggccaagcgcttggtcgagcacggccgcgacgtggtgatcctgctcgactcgatcaca
cgcctcggccgcgcctacaacacggtggtgccgtcctccggcaaggtgctcaccggcggc
gtggacgccaacgcgctccagcgcccgaagcgcttcttcggcgccgcccgcaacatcgag
gagggcggctcgctctcgatcatcgccaccgcgctcatcgacaccggctcgcgcatggac
gaggtgatcttcgaggagttcaagggcacaggcaactccgagatcatcctggaccgcaag
gtctcggacaagcgcatcttcccggccatcgacatcacccgctccggcacccgcaaggag
gagctgctggtcccgccggacgcgctcaagaagacctacgtgctgcgccgcatcctcaac
ccgatgggcgtcaccgacgcgatcgagttcctgctcgacaagctgcgccagaccaagagc
aacggcgacttcttcgactcgatgaacacctga
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