KEGG   Methylobacterium radiodurans: DK427_04340
Entry
DK427_04340       CDS       T05919                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
meti  Methylobacterium radiodurans
Pathway
meti00010  Glycolysis / Gluconeogenesis
meti00020  Citrate cycle (TCA cycle)
meti00260  Glycine, serine and threonine metabolism
meti00280  Valine, leucine and isoleucine degradation
meti00310  Lysine degradation
meti00380  Tryptophan metabolism
meti00620  Pyruvate metabolism
meti00630  Glyoxylate and dicarboxylate metabolism
meti00640  Propanoate metabolism
meti00670  One carbon pool by folate
meti00785  Lipoic acid metabolism
meti01100  Metabolic pathways
meti01110  Biosynthesis of secondary metabolites
meti01120  Microbial metabolism in diverse environments
meti01200  Carbon metabolism
meti01210  2-Oxocarboxylic acid metabolism
meti01240  Biosynthesis of cofactors
Module
meti_M00009  Citrate cycle (TCA cycle, Krebs cycle)
meti_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
meti_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
meti_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:meti00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    DK427_04340 (lpdA)
   00020 Citrate cycle (TCA cycle)
    DK427_04340 (lpdA)
   00620 Pyruvate metabolism
    DK427_04340 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    DK427_04340 (lpdA)
   00640 Propanoate metabolism
    DK427_04340 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    DK427_04340 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    DK427_04340 (lpdA)
   00310 Lysine degradation
    DK427_04340 (lpdA)
   00380 Tryptophan metabolism
    DK427_04340 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    DK427_04340 (lpdA)
   00670 One carbon pool by folate
    DK427_04340 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:meti04147]
    DK427_04340 (lpdA)
Enzymes [BR:meti01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     DK427_04340 (lpdA)
Exosome [BR:meti04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   DK427_04340 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Biotin_lipoyl FAD_oxidored GIDA Pyr_redox_3 Biotin_lipoyl_2 FAD_binding_2 HI0933_like NAD_binding_8 AlaDh_PNT_C DAO FAD_binding_3 HlyD_3 GCV_H Thi4 3HCDH_N HlyD_D23 NAD_binding_9
Other DBs
NCBI-ProteinID: AWN35066
UniProt: A0A2U8VNW4
LinkDB
Position
complement(965479..967326)
AA seq 615 aa
MGNEVRLPDIGDFKDVPIIEVNVSAGDRIAVDDVLLVLESDKATMDIPSPVAGTVAEVRV
KPGETISRGDLLLVMSDTVETGAPKPATTDKASKTVQATPGLSNGPHKPGEGQAGYGSSA
AGATLDGSATKAAPQAAAPVQGEDLRADVLVLGAGPGGYTAAFRAADLGRKVVLVERWPQ
LGGVCLNVGCIPSKALLHAAKVIDETHAMAAHGISFAPPQVDIDKLRDWKDGIVKRLTGG
LGGLARQRKVTVVTGLGRFVSPNQIAVEHEGKSTIVGFDQAIIAAGSEPITMPFIPHGDP
RVIDSTGALELADVPKRLLVIGGGIIGLEMATVYHALGTKVTIVELMDQIIPGADKDLVT
PLAKRIGKQYEAVHLKTKVTNVEATPDGLRVTFKGGSAPATDTFDKILVSVGRRPNGKLI
DAAKAGVIVDERGFVPVDRQMRTNVPHIFAIGDVVGQPMLAHKAVHEGKVAAENASGKNS
FFDAKVIPSVAYTDPEVAWVGLTENEAKGKGIKVGKGVFPWAASGRSLSLGRDEGMTKVL
FDEATDRIVGCGIVGPSAGDLIAEAALAIEMGADAEDIGRTIHPHPTLSETVGMAAEVFE
GTITDIYAPRKPRHP
NT seq 1848 nt   +upstreamnt  +downstreamnt
atgggcaacgaggtcaggttaccggatatcggcgacttcaaggacgtcccgatcatcgag
gtgaacgtgagcgccggcgatcggatcgccgtcgacgacgtcctcctcgttctcgagtcc
gacaaggcgacgatggacattccgtcgcctgtcgccggcaccgtcgccgaggtccgggtg
aaacccggggaaacgatcagccggggggacctgcttctcgtcatgtccgataccgtcgag
accggagctcccaagccggcgacgaccgacaaggcgagtaagacggtccaggcgacgccc
ggactctcgaacggaccgcacaagcccggggagggccaagccggctacggctcgtccgcc
gccggcgcgacccttgacggttccgcgaccaaggccgctccacaagccgccgcgccggtt
cagggcgaggatctgcgggccgacgtgctggtgctcggggccggacccgggggttatacc
gccgcgtttcgcgccgccgatctcggccgaaaggtcgtgctggtggaacgctggccgcaa
ctcggcggcgtctgcctcaacgtcggctgcatcccgtcgaaggcgctcctgcacgccgcg
aaggtcatcgacgaaacccacgcgatggcggcccacggcatcagcttcgcgccaccgcag
gtcgacatcgacaagcttcgtgattggaaggacgggatcgtcaagcgcctcaccggcggt
ctcggcggtctcgccaggcagcgcaaggtcacggtcgtgaccgggctgggacgcttcgtc
agccccaaccagatcgcggtcgagcatgaggggaagagcacgatcgtcggcttcgatcag
gccatcatcgcggccggctccgagccgatcaccatgccgttcattccgcacggcgatccg
cgtgtcatcgactcgaccggcgcgctcgaactcgcagacgttccgaagcgccttctcgtg
atcggcggcggaatcatcggcctggaaatggcgaccgtctatcacgcgctgggcacgaag
gtgaccatcgtcgaactgatggaccagatcatccccggtgccgacaaggatctcgtgacg
ccgctcgcgaagcgcatcggcaagcagtacgaggcggttcacctgaagacgaaggtgacg
aacgtcgaggcgacgcccgacggtctgcgcgtgaccttcaagggcgggtcggcacccgca
acggacacgttcgacaagatcctcgtgtccgtcggacgccgcccgaacggcaaactgatc
gacgcggcgaaagccggcgtcatcgtcgacgaacgcggcttcgtgcccgtcgaccgccag
atgcgcaccaacgtgccgcacatcttcgccatcggcgacgtcgtcggacagccgatgctc
gcgcacaaggccgtccacgaaggcaaggtggcggccgagaacgcctccggcaagaacagc
ttcttcgacgcgaaggtgattccatcggtggcctacaccgatccggaagtggcttgggtc
gggctgacggagaacgaggcgaagggcaagggcatcaaggtcggcaagggggtcttcccg
tgggcggcctcgggccgctcgctctcgctcggacgtgacgaaggcatgacgaaggtcctg
ttcgacgaagcgaccgaccgcatcgtcggctgcggcatcgtcggcccctccgccggcgac
ctcatcgccgaggccgcgctcgcgatcgagatgggcgcggacgccgaggacatcgggcgc
acgatccatccgcatccgaccctgtccgagacggtgggaatggcggcggaggtcttcgag
gggacgattaccgacatctacgcgccgcggaagcctcgtcatccgtag

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