Methylobacterium radiodurans: DK427_04515
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Entry
DK427_04515 CDS
T05919
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
meti
Methylobacterium radiodurans
Pathway
meti00260
Glycine, serine and threonine metabolism
meti00460
Cyanoamino acid metabolism
meti00630
Glyoxylate and dicarboxylate metabolism
meti00670
One carbon pool by folate
meti00680
Methane metabolism
meti01100
Metabolic pathways
meti01110
Biosynthesis of secondary metabolites
meti01120
Microbial metabolism in diverse environments
meti01200
Carbon metabolism
meti01230
Biosynthesis of amino acids
meti01240
Biosynthesis of cofactors
meti04981
Folate transport and metabolism
Module
meti_M00140
C1-unit interconversion, prokaryotes
meti_M00346
Formaldehyde assimilation, serine pathway
Brite
KEGG Orthology (KO) [BR:
meti00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DK427_04515 (glyA)
09102 Energy metabolism
00680 Methane metabolism
DK427_04515 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DK427_04515 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DK427_04515 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DK427_04515 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DK427_04515 (glyA)
Enzymes [BR:
meti01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DK427_04515 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AWN35097
UniProt:
A0A2U8VNB9
LinkDB
All DBs
Position
complement(1016799..1018082)
Genome browser
AA seq
427 aa
AA seq
DB search
MISFDFDTPFADTEIANAIGREFERQTERIELIASENIVSADVLRAQGSVLTNKYAEGYP
GRRYYGGCEHVDTVETLAIERAKALFGASFVNVQPHSGAQANQAVFLALLQPSERILGMS
LAHGGHLTHGSPVTMSGKWFDVASYGVRETDHRIDYDVLRRRARETRPKLIVAGASAYPR
SIDFRAFRQIADEVGAHLMVDMAHYAGLIATKLYPDPLPHAHVVTTTTHKTLRGPRGGMI
LTNDAALAKKINSAVFPGNQGGPLMHVIAAKAVAFGEALRPEFRAYAAAVIANARRLGRV
LTAGGLDIVSGGTDCHMVLVDLRPLGVTGRDAERALERAGLTCNKNAIPFDPEKPAVTSG
IRLGTAAGTTRGFGETEFAAVGDLVLKVVRALASAGSEGDPAVEADVLQEVRGLCRRFPI
YRRSSGL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtgatcagcttcgacttcgacaccccgttcgccgataccgagatcgccaatgcgatcggc
cgggaattcgagcgccagaccgaacgcatcgagctgatcgcttccgaaaacatcgtttcg
gcggacgtgctccgcgcgcagggctcggtgctgaccaacaagtacgccgagggctatccg
ggccggcgctactacggtggctgcgaacatgtcgacaccgtcgagaccctggcgatcgag
cgggcaaaggccctgttcggcgcgagcttcgtcaacgtccagccgcattcgggcgcgcag
gccaatcaggcggtcttcttagctctgctgcagccgagcgagcgcatcctcggcatgtcg
ctggcccatggcggccatctcacccacggttcgccggttaccatgtcgggcaagtggttc
gacgtcgcgagctatggcgtgcgcgagaccgaccaccggatcgactacgacgtcctgcgg
cggcgggcgcgcgagacacgaccgaagctgatcgtggccggcgcctcggcctatccgcgc
agcatcgacttccgtgccttccgccagatcgccgatgaggtcggcgcgcacctcatggtg
gacatggcgcattatgccggcctgatcgcgaccaagctctaccccgatccgctgcctcac
gctcacgtcgtcaccaccaccacccacaagaccctgcggggaccacgcggcggcatgatc
ctgacgaacgacgcggctttggccaagaagatcaactccgcggtcttccccggcaaccaa
ggcggcccgctaatgcacgtcatcgccgccaaggcggtggccttcggcgaggccctgcga
ccggaatttcgtgcctacgccgcagcggtgatcgccaatgctcgaaggctcggccgcgtg
ctgacggcaggtggcctcgatatcgtctcgggcggcaccgactgtcacatggtgctggtc
gatctcagaccgttgggcgtaacgggacgagacgccgagcgtgcccttgagcgggccggc
ttgacctgcaacaagaacgcgattcccttcgacccggagaagcctgccgtgacctcgggc
atccgtctcggaaccgcggccggaacgacgcgcggcttcggcgagaccgaattcgcggcg
gtcggcgacttggtcctgaaggtcgtgcgcgcgcttgcctcggccggatcggagggcgat
ccggccgtcgaggccgacgtcctccaagaagtgcgcggcctttgccgtcgcttcccgatc
taccggcggagttccggcctctga
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