KEGG   Methylobacterium radiodurans: DK427_08645
Entry
DK427_08645       CDS       T05919                                 
Name
(GenBank) MBL fold metallo-hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
meti  Methylobacterium radiodurans
Pathway
meti03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:meti00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DK427_08645
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:meti03019]
    DK427_08645
Messenger RNA biogenesis [BR:meti03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DK427_08645
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B_2 Lactamase_B RMMBL Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: AWN35807
UniProt: A0A2U8VQ86
LinkDB
Position
1884284..1885957
AA seq 557 aa
MTTKQDELVFLPLGGVGEIGMNAALYGFGPEKGRKWIMVDCGMGFAGEEAMPGIDLMFPD
LSFIEERRKDLLGIFITHAHEDHIGAISELWPRLKVPVYATRFAKNLLETRRLGEPGAPK
VELREVKPGKRVTVGPFDLEFVPVSHSIPESNAIAIRTAAGLVVHTGDWKIDPTPVAGSV
TSPEAFKALGDEGILALVCDSTNVVREGFSPSEAEVAQTMRKLIAEAPHRVAVTTFASNV
ARIRAVAEAAQACGREVIAVGRAMDRVIDVARECGYLDGLPDFRRADSWKSLPREKVVAL
LTGSQGEPRAALARVSRRDHPDIQLAGGDRVIFSSRAIPGNERDVGSIINDLIEQGVEVI
TDRTELVHVSGHPRRDEMVEMYAWTRPGTAIPVHGEALHLDEHARFARAQGVQNVVKARN
GSLVRLAPGKPEVITHVKAGRLFKDGNVLIDDKDRAIPERRKLAQAGLVSVAIAIDEDGV
VLGEPAIDIIGLPNRGRTGEPLIEAVVDAVTDTLAGLSKGKLKDSEGVEKTVDRAVRTAV
NEAWGKKPACHVQVVEV
NT seq 1674 nt   +upstreamnt  +downstreamnt
atgacgacgaaacaggacgagctcgtcttcctgccgctcggcggggtgggcgagatcggg
atgaacgcggcgctttacggcttcgggccggagaaggggcgcaagtggatcatggtcgat
tgcggcatgggcttcgcgggcgaggaggcgatgcccggcatcgacctgatgttcccggac
ctcagcttcatcgaggagcgccgcaaggatctgctcgggatcttcatcacccacgcgcac
gaggaccatatcggggcgatcagcgaattgtggccacgcctcaaggtgccggtctacgcc
acgcgcttcgccaagaacctgctggagacccgccgcctcggcgagccgggcgctccgaag
gtcgagctgcgcgaggtgaagcccggtaagcgggtgacggtcggtcctttcgatctcgaa
ttcgttcccgtctcgcactcgatccccgaatcgaacgctatcgcgatccgcaccgccgcg
ggtctcgtggtgcacacgggcgactggaagatcgacccgacgccggtcgcgggctcggtc
acctcgcccgaagcgttcaaggcgctcggcgacgagggcatcctggcgctcgtctgcgac
tccaccaacgtcgtgcgcgagggtttctcgccgtccgaggccgaggtcgcgcagaccatg
cgcaagctcatcgccgaggcgccgcaccgggtcgcggtgacgaccttcgcgtcgaacgtc
gcccgcatccgcgccgtcgccgaggctgcccaggcctgcggccgcgaggtgatcgcggtc
ggccgcgcaatggaccgggtcatcgacgtcgcccgcgagtgcggctacctcgacggcctg
ccggacttccgccgcgccgattcgtggaagagcctgccgcgcgagaaggtcgtggcgctg
ctcaccggctcgcagggcgagccccgcgccgcgctcgcccgcgtctcccgccgcgaccat
cccgacatccagctcgccggcggcgaccgggtgatcttctcctcgcgcgccatccccggc
aacgagcgcgacgtcggctccatcatcaacgacctgatcgagcagggcgtcgaggtgatc
actgaccgcaccgaactcgtccacgtctccggccacccgcgccgggacgagatggtcgag
atgtatgcctggacccggcccggcaccgcgatcccggtccacggcgaggcgctccacctc
gacgagcacgcccgcttcgcccgcgcgcagggcgtgcagaacgtggtgaaggcccgcaac
ggcagcctggtccgcctcgcgcccggcaagccggaggtgatcacccacgtcaaggccggc
cgcctgttcaaggacggcaacgtgctgatcgacgacaaggaccgggcgattcccgagcgg
cggaagctcgctcaggccggcctcgtctcggtcgccatcgccatcgatgaggacggggtg
gtgctgggcgagcccgccatcgacatcatcggcctgccgaaccgcggccgcaccggcgag
ccgctgatcgaggcggtggtcgacgcggtcaccgacaccctggccgggctgtcgaagggc
aagctgaaggactcggaaggcgtcgagaagaccgtggaccgggccgtccggaccgcggtc
aacgaggcctggggcaagaagcccgcctgccacgtgcaggtggtcgaggtctga

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