KEGG   Methylobacterium radiodurans: DK427_08700
Entry
DK427_08700       CDS       T05919                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
meti  Methylobacterium radiodurans
Pathway
meti03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:meti00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    DK427_08700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:meti03400]
    DK427_08700
DNA repair and recombination proteins [BR:meti03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DK427_08700
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      DK427_08700
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 DUF87 AAA_22 UB2H SWI2_SNF2 MutS_II Microtub_bd Kinesin
Other DBs
NCBI-ProteinID: AWN35818
UniProt: A0A2U8VQR6
LinkDB
Position
complement(1899743..1902445)
AA seq 900 aa
MAKPRKPRSATAKGPSKADKPELQPLDPFLADLLNPALNRNRVPEPERPGQVPARRGRRK
ADAASAPRGFGEAPQAGFTVAPGAEVDPRLAQALGLTPPEDGPAPEGQPDTEPVDAGGAS
ATVAALERLLTEGNPLFKNGAAWVPHRPERPKKSEAGIRFVMKSEFEPAGDQPAAIAELV
KGVQANERDQVLLGVTGSGKTFTMAKIIEETQRPALILAPNKTLAAQLYGEFKRFFPDNA
VEYFVSYYDYYQPEAYVPRSDTFIEKESSINEQIDRMRHAATRALLERDDVIIVASVSCI
YGIGSVETYTAMSFTVSLGERIEQRQLIADLVALQYKRIQSDFARGTFRVRGDTIELWPA
HLEDRGWRIGLFGDEIEKIVEFDPLTGKTISELKFVKVYANSHYVTPRPTLQQAIKGIKH
ELKGRIEELTRMGRLIEAQRIDQRCTFDIEMIEATGACNGIENYSRYLTGRKPGEPPPTL
FEYLPDNALVFTDESHVTVPQIGGMYRGDFRRKATLAEYGFRLPSCLDNRPLRFEEWDAM
RPQSVHVSATPGKWEMEQTGGVFAEQVIRPTGLVDPVIEIRPARSQVDDLLGEVRDVAQA
GYRTLVTTLTKRMAEDLTEYLHENNVRVRYMHSDIDTLERIEIIRDLRLGAFDVLIGINL
LREGLDIPECALVAILDADKEGFLRSETSLIQTIGRAARNAEARCILYADQVTGSMERAM
AETERRRQKQLAYNAEHGITPQSVKRGISDILSSVFERDHVQVDTGLAKDAITVGHNLKA
VMADLEKRMRTAAADLDFEEAARLRDELKRLQATELLVSDDPMARQGDVEREAGKFGRKP
PRGSGGSRIAAPDLDNMGPGTDRELPVGAPVWQERPKPRSTQGLGGQKPKYKGGGGRKRG
NT seq 2703 nt   +upstreamnt  +downstreamnt
atggcgaaaccccgcaagccccgcagcgcgacggcgaaaggcccgagcaaggccgacaag
cccgagctccagcccctcgaccccttcctggccgacctgctcaacccggcgctcaaccgc
aaccgggtgcccgagcccgagcggcccggtcaggtgccggcccggcgcgggcgccggaag
gcggacgcggcctccgcgccgcggggattcggcgaggcgccgcaggcgggcttcaccgtc
gcgcccggcgccgaggtcgatccgcgcctcgcgcaggcgctcggcctcaccccacccgag
gacggtccggcaccggagggccagcccgataccgagccggtcgatgcgggcggcgcctcc
gccacggtggcggccctggagcggctgctcaccgagggcaatccgctgttcaagaacggc
gccgcctgggtgccgcaccggcccgagcgcccgaagaagtccgaggccggcatccgcttc
gtgatgaagtcggaattcgagcccgccggcgaccagccggccgcgatcgccgaactcgtg
aagggcgtgcaggccaacgagcgcgatcaggtgctgctcggcgtcaccggctcgggtaag
accttcacgatggccaagatcatcgaggagacgcagcgccccgcgctcatcctggcgccc
aacaagacgctggccgcgcagctctacggcgagttcaagagattcttccccgacaatgcg
gtggagtacttcgtctcgtattacgattattaccagcccgaagcctacgtcccgcgctca
gacaccttcatcgagaaggaatcctcgatcaacgagcagatcgaccggatgcggcacgcc
gccacccgcgcactcctcgagcgcgacgacgtgatcatcgtggcctcggtctcgtgcatc
tacggtatcggttcggtcgagacctacacggcgatgtcgttcacggtctcgctcggcgag
cgcatcgagcagcgccagctcatcgccgacctcgtggcgctgcagtacaagcgcatccag
tcggacttcgcccgcggcaccttccgggtgcgcggcgacacgattgagctctggccggcc
cacttggaggaccggggctggcgcatcggcctgttcggcgacgagatcgagaagatcgtc
gagttcgatccgctgaccggcaagaccatctccgagctgaagttcgtgaaggtctacgcc
aactcgcactacgtcacgccgcgcccgacgctgcagcaggcgatcaagggcatcaagcac
gagctcaaaggtcggatcgaggaactgacccggatgggccgcctgatcgaggcgcagcgc
atcgaccagcgctgcaccttcgacatcgagatgattgaggcgaccggcgcctgcaacggc
atcgagaactactcgcgctacctcacgggccggaaacccggcgagccgccgccgaccctg
ttcgagtacctgcccgacaacgcgctggtcttcaccgacgagagccacgtcacggtgccg
cagatcggcggcatgtaccggggcgacttccgccgcaaggcgacgctcgccgagtacggt
ttccgcctgccctcctgcctcgacaatcgcccgctgcgcttcgaggaatgggacgcgatg
cggccgcaatcggtccacgtttcggcgacccccggcaagtgggagatggagcagaccggc
ggcgtcttcgccgagcaggtgatccggccgaccgggctggtcgatccggtgatcgagatc
cggcccgcccgctcccaggtggacgacctgctgggcgaggtccgcgacgtcgcccaggcc
ggctaccgcaccctcgtgacgacgctcaccaagcgcatggccgaggacctgaccgagtac
ctgcacgagaacaacgtgcgggtgcgttacatgcactcggacatcgataccttggagcgc
atcgagatcatccgggacctccggctcggggccttcgacgtgctcatcggcatcaacctg
ctgcgcgagggcctcgacatcccggaatgcgccctcgtcgccatcctcgacgccgacaag
gagggcttcctgcgctccgagacctcgctgatccagacgatcggccgcgcggcccgcaac
gccgaggcacgctgcatcctatacgccgatcaggtcaccggctcgatggagcgggcgatg
gccgagaccgagcgccgccgccagaagcagctcgcctacaacgccgagcacggcatcacg
ccccaaagcgtaaagcgcggcatcagtgacatcctctccagcgtgttcgagcgcgaccat
gtgcaagtcgatacggggctggccaaggacgcgatcacggtcggccacaacctgaaggcg
gtgatggccgatctcgagaagcggatgcgcaccgccgccgccgacctcgacttcgaggag
gccgcgcggctgcgcgacgagctcaagcgactccaggcgaccgagctcctggtctccgac
gacccgatggcgcgccagggcgacgtcgagcgcgaggccggcaagttcggccgcaagccg
ccccgaggctcgggcggcagccggatcgcggcacccgacctcgacaatatgggtccgggc
accgaccgggagttgccggtcggcgcgcccgtctggcaggagcggccgaagccgcgctcg
acccaggggctcggtgggcagaagccgaagtacaagggcggtggcggacggaagcgtggg
tga

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