Methylobacterium radiodurans: DK427_09365
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Entry
DK427_09365 CDS
T05919
Name
(GenBank) helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
meti
Methylobacterium radiodurans
Pathway
meti03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
meti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DK427_09365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
meti03019
]
DK427_09365
03009 Ribosome biogenesis [BR:
meti03009
]
DK427_09365
Enzymes [BR:
meti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DK427_09365
Messenger RNA biogenesis [BR:
meti03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DK427_09365
Ribosome biogenesis [BR:
meti03009
]
Prokaryotic type
rRNA helicases
DK427_09365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
AWN35918
UniProt:
A0A2U8VR14
LinkDB
All DBs
Position
complement(2055695..2057452)
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AA seq
585 aa
AA seq
DB search
MPFPHLPAAIARALDERGYAEPTPVQSAVLEAAGAGRDLLVSAQTGSGKTVAYGLAMAGT
LLGEAETLPPAGAPLALVIAPTRELALQVQRELSWLYAPAGGRVVSCVGGMDPRREARML
ADGVHIVVGTPGRLRDHLERRNLHPEALRTVVLDEADEMLDLGFREDIEFILSGTPAERA
TFLFSATLPRDIEALAERYQRDALRLAIKSEVRGHADISYRAIRVVPREIEHVVLNVLRE
ADAPTAIVFCNTRNAVRHLQASLTERGFSVVALSGELGQGERNAALQALRDGRARVCVAT
DVAARGIDLPTLSLVIHADLPHDAEVMQHRSGRTGRAGRKGVSVLLVPNARRRRAEQMLA
IAKVTPEWMGPPTADEIRRLDGERMLADPLFSEPPGEEDVALAETLLAERSPAELAALLA
RVYRTRLPAPEDVTDPGDRGGRAVTGRAAYDPMDAERIAAMGPAVWFRLNLGRRDNADPR
RLLPLLTRRGKVDREVIGAIRIFERETKFEIRGGAARQFAEAFARNGSPEIQVEALGNEG
APPPRDFKSPRATKHSRHVERGAEHPAGAKPHRKGKVARAPQQQG
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
ttgccgtttccccatctgcccgccgctatcgcgcgggcgctcgacgagcgcggctacgcc
gagccgaccccggtgcagagcgccgtccttgaggccgccggcgcgggccgcgacctcctc
gtctcggcccagaccgggtcgggcaagaccgtggcctacgggctggccatggccggcacg
ctgctgggcgaggcggagacgctgccgccggcgggcgccccgctcgcactggtgatcgcg
ccgacccgcgaactcgccctccaggtccagcgcgagctgtcctggctctacgccccggcc
ggcggccgcgtcgtctcctgtgtcggcggaatggatccgcgccgcgaggcccggatgctc
gccgacggcgtccacatcgtcgtcggcacgccggggcgcctgcgcgaccatctggagcgc
cgcaacctgcatcccgaggcgctgcgcaccgtcgtcctcgacgaggccgacgagatgctg
gatctcggcttccgcgaggatatcgagttcatcctctcgggcacgcccgctgagcgcgcg
accttcctgttctcggccaccctgccgcgggacatcgaggcgctggccgagcgctaccag
cgcgacgcgctgcgcctcgcgatcaagagcgaggtgcggggccacgccgacatcagctac
cgggcgatccgggtggtgccgcgcgagatcgagcacgtggtgctcaacgtgctgcgcgag
gccgacgcgccgaccgcgatcgtgttctgcaacacccgcaacgcggtgcgccatctccag
gcgagcctgaccgagcgcggcttctcggtcgtcgcgctctcgggcgagctcggccagggc
gagcgcaacgccgccctccaggcgctacgcgacgggcgcgcccgggtctgcgtggcgacc
gacgtggcggcccgcggcatcgacctgccgacgctgagcctcgtcatccacgccgacctg
ccgcacgatgccgaggtgatgcagcaccgctcgggccgcaccggccgcgccggccgcaag
ggcgtgagcgtcctgctggtaccgaacgcccgccgccgccgggccgagcagatgctggcc
atcgccaaggtgacgcccgagtggatgggcccgcccaccgccgacgagatccgccggctc
gacggcgagcgcatgctcgccgacccgctcttcagcgagccgccgggcgaggaggacgtg
gcgctggccgagacgctgctggccgaacgcagccccgccgaactcgcggccctgctggcg
cgggtgtaccgcacccgcctgccggcgcccgaggacgtcaccgatccgggcgaccggggt
ggccgcgcggtcacgggccgcgcggcctatgacccgatggacgccgagcgcatcgccgcg
atgggtccggccgtatggttccggctcaatctcggccggcgcgacaacgccgacccgcgc
cgcctgctgccgctgctgacccggcgcggcaaggtcgaccgcgaggtgatcggcgccatc
cgcatcttcgagcgcgagaccaagttcgagatccgcggcggcgcggcccgccagttcgcc
gaggccttcgcccgcaacggctcgccggagatccaggtggaggcgctcggcaacgagggt
gcgccgccgccgcgggacttcaagagcccccgcgcgaccaagcacagccgtcacgtcgag
cggggtgccgagcatccggctggggccaagccccaccgcaagggcaaggtcgcccgcgcg
ccgcagcagcagggctga
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