KEGG   Methylobacterium radiodurans: DK427_12335
Entry
DK427_12335       CDS       T05919                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
meti  Methylobacterium radiodurans
Brite
KEGG Orthology (KO) [BR:meti00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:meti03400]
    DK427_12335
Enzymes [BR:meti01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     DK427_12335
    5.6.2.6  RNA 3'-5' helicase
     DK427_12335
DNA repair and recombination proteins [BR:meti03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    DK427_12335
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: AWN36417
UniProt: A0A2U8VRT3
LinkDB
Position
2671069..2673783
AA seq 904 aa
MSADHLPPAFRAWFSGRGWSPRPHQLDLLRIAGEGRSALLVAPTGAGKTLAGFLPSLVGL
SATKASQRRGLHTLYVSPLKALAVDIARNLEAPVAEMGLPVRVETRTGDTPAHKRTRQIA
RPPDILLTTPEQLALLIAHREAADLLANLRCVILDELHALVTSKRGDLLSLALARLHRLS
PGLTAIGLSATVREPDELRKYLVPQRPSGADDPNAADPLSQRAGRGPRLPLVGERGEPAG
EGEGTSTDEPRPAPPPHPRSGFAPRGLGGVPAPLSPPSGERGATGLADLVVVKGGAPPDL
RLLESNRPLPLAGHTAHQSMPAIYELIRQHRTVLVFVNTRLQAEYTFQELWRLNDDVLPI
ALHHGSLDAQQRRRVEAAMAAGQLRAIVCTATLDLGIDWGDVDLVVNIGAPKGASRIMQR
IGRANHRMDEPSKAYLVPANRFEILECRAALDAVEEAAQDTPDARVGALDVLAQHVLGMA
CADAFDPLHLYEEIVSAAPYAKLAWEDFEAVVDYVATGGYALRAYERFAKILRGPDGLWR
VRDARTAQQYRMNIGTIVESAKVKVRLVRSVRAKPGTILPKTGRVLGEIEEDFAETLTVG
DTFLFSGEVLRFEGLMEDEAMVTRAGPGTDPAIPSYAGSKFPLSTFLAARVRALIADPFE
WDRLPRQVADYLVQQRSRSVLPGPRDLLVETFPRAKRSYLSAFPFEGRLAHQTLGMLLTR
RLERAGLRPLGFAANDYGLAIWMTRDISERIAREPGFLAELFAQDMLGDDLEAWLAESAM
MKRTFRQCAVIAGLIERRHPGQKKTGRQVTISTDLVYDVLRKHQPDHLLLRAARQDAATG
LLDVRRLGMMLERIQGRIIHRALDRVSPLSVSVMLEIGREKVYGEGADEILAEAEAQLLE
EALG
NT seq 2715 nt   +upstreamnt  +downstreamnt
ctgagcgcggatcacttacccccggccttccgggcctggttctcggggcgcggctggagt
ccgcgcccgcaccagctcgatctcctgcgcatcgcgggcgagggccgctccgcgctcctc
gtcgcgccgaccggggccggcaagacgctggccggcttcctaccgagcctcgtcggcttg
agcgccacgaaggcgtcgcagcgccgggggcttcacaccctctacgtctcgcccctgaag
gcgctcgcggtcgacatcgcccgcaacctggaggcgccggtggccgagatggggctgccg
gtccgcgtcgagacccgcaccggcgacaccccggcgcacaagcgcacccgccagatcgcg
cgcccgcccgacatcctgctgacgacgcccgagcagctcgccttgctgatcgcccaccgc
gaggcggcggacctgcttgcgaacctccgctgcgtgatcctcgacgagctgcacgcgctg
gtgacctcgaagcggggcgatcttctctcgctggcgctggcgcggctgcaccgcctgagc
ccggggctgaccgcgatcggcctgtcggccacggtgcgggagccggacgagctgaggaag
tatctcgtgccgcagcggccgagcggtgcggatgatccgaatgccgcggatcccctctcc
cagcgcgcggggagagggccgcgtctccccctcgtcggggagcgcggcgagccggcaggc
gagggtgaggggacttcgacggacgagcctcgccctgcgcccccccctcacccccgctcc
ggcttcgctccccgcgggctcggcggggtgcccgcccccctctccccgcccagcggggag
aggggggcgaccggcttggccgacctcgtggtggtgaagggcggcgccccaccggacctg
cgcctgctcgaatcgaaccgtccgctgccgctcgccgggcacaccgcccaccagtcgatg
ccggcgatctacgaattgatccgccagcaccgcacggtgctggtcttcgtcaacacacgg
ctgcaggccgagtacaccttccaggaactctggcgcctcaacgacgacgtgctgccgatc
gcgctccatcacggctctctcgacgcgcagcagcgccgtcgggtcgaggccgcgatggcg
gcggggcagttgcgcgccatcgtgtgcaccgcgaccctcgatctcggcatcgactggggc
gacgtcgacttggtggtcaacatcggcgcaccgaagggggcgagccggatcatgcagcgg
atcgggcgggccaaccaccggatggacgagccctcgaaggcctacctggtcccggccaac
cgcttcgagatcctggagtgccgcgcggccctcgacgccgtcgaggaggccgcccaggac
acgcctgacgcgcgggtcggcgccctcgacgtgctcgcccagcatgtgctcggcatggcc
tgcgccgacgccttcgatccgctgcacctgtacgaggagatcgtctcggccgcgccctat
gcgaagctcgcctgggaggatttcgaggcggtggtcgattacgtggcgaccggcggctac
gcgctgcgcgcctacgagcgcttcgccaagatcctgcgcggcccggacgggctctggcgg
gtgcgcgacgcccgcaccgcccagcagtaccggatgaacatcggcaccatcgtggaatcc
gcgaaggtgaaggtgcgcctcgtccgctcggtgcgggccaagccagggaccatcctgccg
aagaccggccgggtgctcggcgagatcgaggaggatttcgccgagacgctgaccgtcggc
gacacgttcctgttctccggcgaggtgctacgcttcgaggggctgatggaggacgaggcg
atggtgacgcgggccgggcccggcaccgacccggccatcccgagctacgcgggatcgaaa
ttcccgctctcgaccttcctggccgcacgcgtgcgggccctgatcgccgatccattcgag
tgggaccgcctgccgcgccaagtggccgactacctcgtgcagcagcgcagccgctccgtg
ctgcccgggccgcgcgacctgctggtcgagaccttcccgcgggccaagcgctcctacctg
tcggcctttccgttcgagggcaggctcgcccaccagacgctcggcatgctgctcacccgg
cggctggagcgggcgggcctgcgcccactcggtttcgccgccaacgattacggcctcgcg
atctggatgacgcgcgacatctcggagcgcatcgcccgcgagcccggcttcctcgccgaa
ctcttcgcccaagacatgctgggggacgacctcgaggcgtggcttgccgaatccgcgatg
atgaagcgcaccttccggcaatgcgcggtgatcgccgggctgattgagcggcgccatccc
ggtcagaagaagaccgggcggcaggtcacgatctccacggatctggtctacgacgtgctg
cgcaagcaccagcccgaccacctgctcctgcgcgccgcgcgccaggatgcggcaaccgga
ctcctcgacgtgaggcgcctcggcatgatgctagagcgcatccaggggcgaatcatccac
cgggcgctcgaccgcgtctcgccgctctccgtctccgtgatgctggagatcgggcgcgag
aaggtctacggcgagggcgcggacgagatcctggccgaggccgaggcgcagcttctcgaa
gaggcgcttggctag

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