KEGG   Methylobacterium radiodurans: DK427_20485
Entry
DK427_20485       CDS       T05919                                 
Symbol
rnd
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
meti  Methylobacterium radiodurans
Brite
KEGG Orthology (KO) [BR:meti00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:meti03016]
    DK427_20485 (rnd)
Enzymes [BR:meti01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     DK427_20485 (rnd)
Transfer RNA biogenesis [BR:meti03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    DK427_20485 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC RNAseD_HRDC_C
Other DBs
NCBI-ProteinID: AWN37815
UniProt: A0A2U8VVQ3
LinkDB
Position
complement(4371757..4372911)
AA seq 384 aa
MDLISTTQALEDACARLAAQPFVTVDTEFMRETTYYPKLCLIQMAAPDGTGVLVDPLAKG
IDLKPFLDLMADEGVVKVFHSARQDLEIIWLMGEILPHPFFDTQVAAMVCGYGDSVSYEQ
LVNDVAKAKVDKSSRFTDWSRRPLSDAQLAYALSDVTHLVKVYEKLAGELLRTDRGAWLD
EEMGVLISPDTYRADPAHAWRRLSGRMRKPREIAVLMEVAAWREREAQARNVPRGRILKD
EAVIDIATAGPRSVEALGRLRTIPAGFERSRTGTEILAAVEQGFARDLSEIRLPERARSR
GGGNGALVELLKVLLKAVSENEGVAPKIIATVDDLEAVADDDEAEIPLLQGWRRALFGEK
ALALKHGRLALSAEGGRIVVRALD
NT seq 1155 nt   +upstreamnt  +downstreamnt
atggacctgatcagcaccacacaggcgctcgaagacgcctgcgcccggctcgccgcacag
cccttcgtgaccgtcgacacggagttcatgcgcgagacgacctactacccgaagctctgc
ctgatccagatggcggcgccggacgggacgggcgtgctggtcgatccgctcgccaagggg
atcgacctcaagcccttcctggacctgatggccgacgagggcgtggtcaaggtgttccac
tccgcccgccaggatctcgagatcatctggctgatgggcgagatcctgccccacccgttc
ttcgacacgcaggtcgccgccatggtctgcggctacggcgactcggtctcctacgagcag
ctcgtcaacgacgtcgccaaggccaaggtcgacaagtcgtcccgcttcaccgactggtcg
cgccgcccgctctcggacgcgcagctcgcctacgcgctctcggacgtgactcacctcgtc
aaggtctacgagaagctggcgggcgagctgctgcgcaccgaccgcggcgcctggctcgac
gaggagatgggcgtgctgatctcgccggacacctaccgggccgacccggcgcacgcctgg
cgccggctctcgggccggatgcgcaagccccgcgagatcgccgtgctgatggaggtcgca
gcctggcgcgagcgcgaggcgcaggcccggaacgtgccgcgcggtcgcatcctcaaggac
gaggcggtgatcgacatcgccaccgcgggtccccgaagcgtcgaggcgctcgggcgcctg
cgcaccatccctgccggcttcgagcgctcgcgcaccggcaccgagatcctggcggcggtc
gagcagggattcgcccgcgacctctccgagatccggctgcccgagcgggcgcgcagccgc
ggcggcggcaacggcgccctcgtcgagttgctgaaggtgctcctgaaggcggtgagcgag
aacgagggcgtcgcgcccaagatcatcgcgacggtggacgacctcgaagccgtggcggac
gacgacgaggcggagatcccgctgctccagggctggcgccgcgccctgttcggcgagaag
gcgctggcgctcaagcacggccgcctcgcgctctccgccgagggcggccgcatcgtcgtg
cgcgccctggattag

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