Methylobacterium radiodurans: DK427_21575
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Entry
DK427_21575 CDS
T05919
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
meti
Methylobacterium radiodurans
Brite
KEGG Orthology (KO) [BR:
meti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
meti03009
]
DK427_21575
Enzymes [BR:
meti01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
DK427_21575
Ribosome biogenesis [BR:
meti03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DK427_21575
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AWN38004
UniProt:
A0A2U8VW01
LinkDB
All DBs
Position
complement(4596370..4597785)
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AA seq
471 aa
AA seq
DB search
MTQKPPHRGGPGKGGRGSSAGKGPPKGPPKGPAAGRGASRGPRPARPERARTGPRSSALD
AAQRAAQLRGDERDARQPWSPVDAEAPAPAKVRLEKSRTEKPRAERAPRRTDAPRTPAAP
AAAPAPSRREQRAAASATLASGVQTLTVEPDEDGMRVDRFLTARFPQLPFTRIQSLVRKG
ELRIDGKRAKSQDRLAPGQSVRVPPLKLDAEAPRPRNPVRDRDDAEFVRSLILYEDQDMM
VLNKPFGLAVQGGSGTVRHVDGLLDALTGPDGQKPRLVHRLDKDTAGCLIVAKTRLAAST
LAKSFRSRAARKIYWALTAGVPKVRQGRVSTYLVKDEPAEADARMRVAKHGEEGASHALT
YYAMVDQAAQKLSWISFKPVTGRTHQLRAHAAHIGHPIVGDPKYFDVENWALPGGIQNRL
HLLARRIVIPHPRTGRPVDVSAPLPPHMAQSWNLLGFDAARYDPVVDAPED
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagaagcctccccatcgcggcggccccggaaagggcggccgcggctccagcgcg
ggcaaagggccgcccaagggccccccgaagggtccggccgccggacgcggcgcgagccgc
gggccgcgtccggcgcgcccggagcgcgcccgcaccggcccgcgcagcagcgccctcgac
gcggcccagcgcgcggcgcagttgcgcggcgacgagcgcgacgcgcgccagccctggtca
ccggtcgacgcggaggcgcccgcgcccgcgaaggtccgcctcgagaagtcccggaccgag
aagccccgggcagagcgtgcgccgcggcgcaccgacgccccgcgcacgcccgccgccccc
gcggcggcacccgccccgagccggcgcgagcagcgcgcggcggcctccgccaccctggcc
tccggcgtgcagaccctgacggtcgagccggacgaggacgggatgcgggtcgaccgcttc
ctcaccgcgcggtttccccaactccccttcacccggatccagagcctcgtgcgcaagggc
gagctccggatcgacggcaagcgggcgaaatcccaagacaggctggcgccgggccagagc
gtgcgcgtgccgccgctgaagctcgacgcggaggcgcctcgcccgcgcaacccagtgcgc
gaccgggacgacgcggagtttgtgcgctcgctgatcctctacgaggaccaggacatgatg
gtcttgaacaagcccttcggcctcgcggtccagggcggctcgggcaccgtgcggcacgtg
gacggcctgctcgacgcgctcaccggcccggacgggcagaagccgcgcctcgtccaccgg
ctcgacaaggacacggccggctgcctcatcgtcgccaagacccggctcgccgcctcgacc
ctcgccaagagcttccgctcgcgcgccgcgcgcaagatctactgggcgctgacggcgggc
gtgccgaaggtgcgccagggccgggtctcgacctatctggtgaaggacgagccggccgag
gcggatgcccgcatgcgggtggccaagcacggcgaggagggcgcctcccacgcgctcacc
tactacgcgatggtcgatcaggcggcgcagaagctgtcctggatctcgttcaagccggtg
acgggacgcacccaccagttgcgggcgcacgccgcccatatcggacacccgatcgtcggg
gacccgaaatatttcgacgtcgagaactgggcgctgcccggcggcatccagaaccggctg
cacctgctggctcgccgcatcgtgatcccccacccgcgcaccggccggccagtggacgtc
agcgcgccgctgccgccgcacatggcccagagctggaacctgctcggcttcgacgccgcc
cgctacgacccggtggtcgacgcgccggaggattga
DBGET
integrated database retrieval system
