Methanothermobacter sp. THM-2: FZP68_00130
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Entry
FZP68_00130 CDS
T07724
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
metj
Methanothermobacter sp. THM-2
Brite
KEGG Orthology (KO) [BR:
metj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metj03400
]
FZP68_00130 (phrB)
Enzymes [BR:
metj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FZP68_00130 (phrB)
DNA repair and recombination proteins [BR:
metj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FZP68_00130 (phrB)
Prokaryotic type
FZP68_00130 (phrB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
AP_endonuc_2
DUF7239
Motif
Other DBs
NCBI-ProteinID:
QHN07329
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All DBs
Position
complement(36127..37461)
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AA seq
444 aa
AA seq
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MIHDERIMSLNTEKPARDGKYVIYWMQASVRAHWNHALEYAIETANSLHKPLIVIFGLTD
EYPNANSRHYRFLIEGLRDVGDALLKRGVRLVVENERPPSAVMNYSDEASAVVVDRGYLD
IQREWVDELAESLHIPLMQVESNVIVPVETASPKEEYSAGTFRPKITRELERFMVPLQER
RLAVDSLDLDPGPDLNDATGKFRVPEELEPSSFRGGTSEAIRLFDEFLSQKLSCFEKYRN
DPVKNCLSNMSPYLHFGHISPLYLALKASEVGKCPEFLEELIVRRELSMNFVHYSDNYSS
IRCLPEWAQNTLMEHARDPREYEYTLREFEEARTHDPYWNAAQKEMVITGKMHGYMRMYW
GKKILEWTDHPERAYDIALYLNDKYEIDGRDPNGFTGVAWCFGKHDRAWAEREVFGKVRY
MNDRGLERKFQIGEYVRRVQELEE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgatacatgatgagaggataatgagcctcaacactgaaaaaccagctagggatggtaag
tacgtcatctactggatgcaggcctcggtgagggcacactggaatcatgcccttgagtat
gcaattgaaactgccaacagcctccataaaccgctaattgtcatatttggactcacagat
gaataccccaatgccaactcccgccactacagattcctcatagagggcttgagggatgtt
ggggatgccctcctgaagaggggtgtgaggctcgtggttgaaaatgaaaggcccccctca
gctgtcatgaactactcagacgaggcctctgcagtggtggtggacaggggataccttgac
attcagagggaatgggtggatgaactcgctgaatcactccacatccccctgatgcaggtt
gaaagcaacgttatagtacccgttgaaacagcctcccccaaggaggagtattctgcaggg
accttcaggccaaagataacaagggagcttgaaaggttcatggtccccctccaggagcga
aggcttgctgtggattcccttgaccttgacccgggccctgatcttaatgatgccaccgga
aaattcagggtccccgaggaactggagccctccagcttcaggggtgggacctctgaggca
ataaggctatttgatgagtttctttcacagaaactttcatgctttgagaagtacaggaat
gaccctgtgaagaactgcctatcaaatatgagcccgtaccttcatttcggacatatatca
ccgctttaccttgccctgaaagcgtcagaggttggcaaatgccctgaattccttgaggaa
ctcattgtgagaagggaactcagcatgaacttcgtgcactacagtgataattacagcagc
ataaggtgtcttcctgagtgggcccagaacaccctcatggagcacgcaagggaccccaga
gaatacgagtacaccctcagggaatttgaggaggccagaacccatgatccctactggaac
gccgcccagaaggagatggttatcaccggaaagatgcacggttacatgaggatgtactgg
ggtaaaaagatcctggaatggacagatcaccctgaaagggcctatgatatagcactttac
ctcaatgataagtatgagatagatggaagggaccccaatggtttcacaggggttgcctgg
tgtttcggtaaacatgaccgggcctgggccgaaagggaggtattcggaaaggtgaggtac
atgaatgaccgtggacttgaacggaaatttcagataggtgaatatgtgaggagagtccag
gagctggaagaataa
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