Methanothermobacter sp. THM-2: FZP68_01200
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Entry
FZP68_01200 CDS
T07724
Name
(GenBank) exosome complex exonuclease Rrp41
KO
K11600
exosome complex component RRP41
Organism
metj
Methanothermobacter sp. THM-2
Pathway
metj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
metj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FZP68_01200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
metj03019
]
FZP68_01200
Messenger RNA biogenesis [BR:
metj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
FZP68_01200
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
FZP68_01200
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
QHN07509
LinkDB
All DBs
Position
233232..233954
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AA seq
240 aa
AA seq
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MVHIITQDQSKTPSGVREDGRAFDELRPIKIEAGILERADGSSYMEFGGNKILVAVYGPR
EAQIRKLQRPDRAVIRCRYNMAPFSVDERKRPGPDRRSVEISKITAEALRPALLLEKFPR
SVIDVFIEVLEAEGGTRCAGITAASVALADAGIPMRDMVAACAAGKIDDQVVLDPSEKED
KEGQADVPVAILARSKEITLLQSDGNLSEDEFERALDLAVEGCLRIHEVQKEALRKRYGE
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtggttcatatcatcacacaggatcaatcaaaaacaccttccggtgtaagggaggatgga
agggccttcgatgaactcagacccattaaaatcgaggcaggaatccttgaaagggctgat
ggttcatcttacatggaatttggtggtaacaaaatactggtagcagtctatgggccaagg
gaagcccagataaggaaactgcagcgacccgacagggctgtgataaggtgcagatacaac
atggcacccttctctgttgatgagaggaagagacccggccctgacaggaggtccgttgaa
atctctaagataactgcagaggcactcaggcccgcactgctccttgaaaaattccccaga
tcagttatagacgtcttcatagaggtccttgaggcagagggaggtacaaggtgtgcgggt
ataacagcagcatcggtggcccttgcagatgcaggcatacccatgagggacatggtcgct
gcctgcgccgcgggtaagatagatgaccaggtagtccttgacccctctgagaaggaggat
aaggagggccaggcagacgtccccgtggccatacttgccaggtcaaaggagataacactg
ctccagagcgatggaaacctctctgaggatgaattcgaaagggcccttgaccttgcagtt
gaaggttgcctcaggatacatgaagtgcagaaagaggccctgagaaagaggtatggtgag
taa
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