Methanothermobacter sp. THM-2: FZP68_01340
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Entry
FZP68_01340 CDS
T07724
Name
(GenBank) DEAD/DEAH box helicase
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
metj
Methanothermobacter sp. THM-2
Brite
KEGG Orthology (KO) [BR:
metj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
metj03019
]
FZP68_01340
Messenger RNA biogenesis [BR:
metj03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
FZP68_01340
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5814
DEAD
Helicase_C
ResIII
DEXQc_Suv3
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
QHN07535
UniProt:
A0A6B9TIK2
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Position
259218..261722
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AA seq
834 aa
AA seq
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MIVLNRRRRSVDFIPAGSPKGALNTRRKPGYWGKLKIKKTSSGPRIARFSVEKDERETLR
KPSEAIKLLRKQAVFLTGRDEELEELLENHGIRYRYTRVCQHCLHEGYVTLVSSRASTKH
EGQIICSRCVDEVIRRELKLAGMDKSAFRNFRRLIRRGVSLERVLEMMSPRFDPLANHEL
TLYDMVTATADRTPKVPLDRLELPEKFKRILRREGSRVLRPVQVLAVDAGLLEGAGLMVV
SATASGKTLVGELAGIPRAMRGERFIYLTPLVALANQKYRDFKKRYSSLGLKTAIKVGMS
RIKAKGELRIPDTDVADADIIVGTYEGIDYILRSGRASLLGDVGVVVVDEIHTLEDEERG
ARLSGMIWRIKRLFPNAQIIALSATVKNSAELASDFDLKLVEYDERPVPLERHLIFSRSG
EEKKNIILRLAKREFSLKSRQGFQGQTIIFTNSRRKTRLIAEYLTRNGVSAAAYHAGLSY
AERQRIEKAFASQKLAAVVTTAALAAGVDFPASQVIFETLLMGNRWLTPNEFSQMLGRAG
RPSYHDRGVVYVLAEIGMEFDGDSEEAVALDLLESGPEPVEVHHTDENLLENLLADITSG
AIGSEYDITSEASWSMEGDMALDILESSGLISRKRKLRATDYGMAVSRSFLNVQDAEYIR
RNLKSKKPLDIAVELEPFEGVYLSGRLHRGLTRALGTNVSMRLTADSTLDIISSGDTIIK
LDKNLQEAVLGIQMDFLSCECTDRPFCGCVQRRLSEHILHERMSGRDPGDISKALLSGYH
IQAYPGDIFSWLDRTVRTVESIGRVASAFKQRNILKECSGIIRAIEKGKPIRAL
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgatagtcctgaatagaagaaggagatcagttgattttatacccgccggaagtccgaag
ggggccctgaacacccgcagaaagccagggtactggggaaagctgaaaatcaaaaaaacc
tcctctggccccagaatagcaaggttcagtgtggagaaggatgaaagggaaaccctcaga
aaaccctcagaggccataaaactcctgaggaaacaggccgtatttctaactggacgggat
gaggaacttgaagaactgcttgaaaatcacggtatcaggtacaggtatacaagggtatgc
cagcactgcctccatgagggctatgttacccttgtgagctcaagggcatcaacgaagcat
gaaggtcagatcatatgctcaaggtgcgttgatgaggtaataagaagggagctcaaactt
gcgggcatggataagtcggcattcagaaacttcaggaggctgatcaggaggggtgtaagc
cttgaaagggtccttgagatgatgtccccccggttcgacccgctggcgaaccatgaactg
acgctctatgatatggtgactgcaacagcagacagaacccccaaggtgccccttgaccgc
cttgagcttcctgagaaatttaagcggattctcagaagggagggtagcagggtgctgagg
ccagtgcaggtccttgcggttgatgctggtctccttgagggcgccggtcttatggttgta
tctgcaaccgcaagtggaaagacccttgtgggtgaacttgcaggtatccccagggcaatg
aggggtgaaaggttcatctatctcacaccactcgttgcacttgcaaaccagaagtacagg
gactttaagaagagatactcttcgcttggactcaaaacagccataaaggttggtatgagc
aggataaaggcaaagggcgagcttcggattcctgataccgatgtggctgacgccgatata
atagttggtacctacgagggaatcgactacatcctcaggtcagggagggcgtctctcctc
ggtgatgtgggtgtggttgtggttgacgagatacacacccttgaggatgaggagagggga
gcaaggctcagtggcatgatatggcggataaaaaggctattccccaatgcccagatcata
gcgctctctgcaacagtcaaaaactccgcggaactggcatcagattttgacctgaagctc
gttgagtacgatgaaagacccgtgccacttgaaagacacctcatattctcaaggagcggt
gaggaaaagaagaacattatactgaggcttgcaaaacgcgagttctccttgaagtcaagg
caggggttccagggacagacgataatattcacaaactcccggaggaaaaccaggctcatt
gcagagtacctcacaaggaacggggtcagtgcagccgcatatcatgcaggtttatcctac
gctgagaggcagcggatagaaaaggccttcgcatcccagaaactcgccgcggttgtcacg
acagcagcacttgcagctggagttgactttccggcatcacaggttatatttgaaacgctt
ctcatgggtaaccgctggctcaccccaaatgagttttcacagatgcttgggcgcgctggc
aggccatcctaccatgaccggggtgttgtctatgttcttgcggaaattggcatggaattt
gatggtgattcagaggaggccgtcgcccttgacctccttgaaagtggccctgaacccgtc
gaggtccaccatacagatgaaaaccttcttgaaaatctcctggcagatataacctccggg
gctatcggatcagagtatgatatcacgtctgaggcgtcatggtccatggagggggacatg
gcgcttgatatccttgagtcatctggtcttataagcaggaaaaggaaactcagggcaact
gattatgggatggccgtctccagatcctttttaaatgtgcaggatgcggagtacataagg
agaaacctcaagagtaaaaaacctctcgatattgcggttgaacttgaaccatttgaggga
gtgtatctctcgggaagactccacaggggattaactagggcacttggcaccaatgtttcg
atgcggctaacggctgactcaactcttgatataatatctagtggagatactatcataaaa
cttgataaaaatctacaggaggctgttcttggaatacagatggattttctttcatgtgaa
tgcacagatagaccattctgtgggtgtgttcagcgaagattatcagagcatatacttcat
gagagaatgagtggcagggatcccggggatataagtaaggctcttctttcaggatatcat
attcaggcttatcctggagatattttcagctggcttgacaggacggtgaggacagttgag
tccattgggagggttgcctctgcatttaaacagagaaatattttgaaggaatgttcaggg
attataagggccattgaaaagggcaaacctattagagcattataa
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