Methanothermobacter sp. THM-2: FZP68_02085
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Entry
FZP68_02085 CDS
T07724
Name
(GenBank) replication protein A
KO
K07466
replication factor A1
Organism
metj
Methanothermobacter sp. THM-2
Pathway
metj03030
DNA replication
metj03420
Nucleotide excision repair
metj03430
Mismatch repair
metj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
metj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FZP68_02085
03420 Nucleotide excision repair
FZP68_02085
03430 Mismatch repair
FZP68_02085
03440 Homologous recombination
FZP68_02085
03460 Fanconi anemia pathway
FZP68_02085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
metj03000
]
FZP68_02085
03032 DNA replication proteins [BR:
metj03032
]
FZP68_02085
03400 DNA repair and recombination proteins [BR:
metj03400
]
FZP68_02085
Transcription factors [BR:
metj03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
FZP68_02085
DNA replication proteins [BR:
metj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
FZP68_02085
DNA repair and recombination proteins [BR:
metj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
FZP68_02085
MMR (mismatch excision repair)
FZP68_02085
DSBR (double strand breaks repair)
HR (homologous recombination)
FZP68_02085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
Rep_fac-A_C
SHLD2_OB1
DUF5088
RecG_wedge
Zn_Ribbon_TF
DZR_2
Zn_ribbon_15
Zn_Ribbon_1
Motif
Other DBs
NCBI-ProteinID:
QHN07654
UniProt:
A0A6B9THC2
LinkDB
All DBs
Position
414772..417150
Genome browser
AA seq
792 aa
AA seq
DB search
MKEELKREYERIKDRMSLEEFQELIEKRKEEYGDVGFMDDVAIATTVVDEILGDENTMLS
EKEEHRMDTISKLEEGAEAPVTGRVMKISSPRTFTTRKGREGKLANVIIADNTGELRTVF
WTENMKLLKKFNEGDVIRIRDVRIRGGFGGRKEAHLMPRSRVEILDPADFPDFPEYREEI
TPIADLDEEQEVNVIARITGISRVRTFERDGREGRFISLDIMDETGSTTYTIWNNDVSLV
EELDLKEGDEVKILGAQTRRRGDSVTLTHTSLTRIVPGEYDVPEYSEKVVKIGDLHEMES
ATVMGLVTRVHDPVEFERNDGTTGSVRSIEITDDTGSARVTLWDDDTRIKINKGDIVRIS
GARVEFDEFNQSYRINTNFNTRITVNPESDGSLLKVLEEYREHLRPLKIAEVLEMEDEGE
EVDVVGRIFSLSDPREFERQDGTGIVRSMELADETGKIRVSLWDEKAEKPLNVGDAVRIE
NARIRLGLYSVELNTGRTTRIVEPLPEDIENLPSFEELEEMLYTTKKIDELEEDDRNIRI
IARVVDLFDPREFQRGDGTPGLVRTVEFADDTGSIRASLWDDAAEKPLSIGDAVRIENPR
VIYRDDMGGERLELSIGRNSRIEPATERDIRGLPSFEELQEILYPLVNIEDLQEDSRNVM
IKGELTEMSGRRILSIKCPSCNERLELSDENICNFCGALVDEPRYLLMIPGRIMDDTGEV
LITFFGREAEKLLGMSTREVVDIINQSADESALEERVEDLNGVTVEVIGNADFDEYNEEP
RFIPRKVVNIEL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagaacttaagagggaatatgagaggattaaggacagaatgtcccttgaggaa
tttcaggagctaatagagaaaaggaaagaggaatatggggacgtaggattcatggatgat
gttgcaattgcaacgacggtggttgatgagatcctcggggatgaaaatacgatgctatca
gagaaggaagagcacaggatggacaccatatccaaacttgaggagggtgcagaggcaccg
gtgacaggcagggttatgaaaatatcaagtcccaggaccttcacaacaaggaagggaaga
gagggaaaacttgccaatgtgataattgcagataacacaggggaacttcgaaccgttttc
tggacggagaacatgaagctcctcaagaaattcaatgagggcgatgtgatcaggataagg
gatgttagaataaggggtggattcgggggcagaaaggaagcccatctgatgccaaggtca
agggttgagatccttgaccctgcggatttcccggactttccagaatacagggaggagata
acccccatcgctgatcttgatgaagaacaggaggtcaacgtcattgcaagaataacaggc
atatcccgggtgaggacctttgagagggatggccgtgagggaaggttcatttcccttgac
ataatggacgaaacaggctcaaccacatacacaatctggaacaacgacgtcagcctcgtg
gaggagcttgatcttaaggagggagacgaggttaaaatacttggggcccagacaaggaga
aggggtgatagtgtaacactcacacacaccagcctgaccaggattgtgccaggggaatat
gatgttcccgagtacagtgagaaggtggttaagataggggacctccatgagatggagagc
gcaactgtgatgggccttgtaacaagggttcatgaccctgtggaatttgaaagaaatgat
ggaacaacaggttctgtaagatccattgagattacagatgataccggctctgcaagggtg
acgctatgggatgatgacacccgcataaaaatcaacaagggggacattgtaaggatatca
ggtgcaagggttgaatttgatgagttcaaccagtcatacagaatcaacacaaacttcaac
acccgcatcaccgtcaaccccgaatctgatggttcgctccttaaggtccttgaggagtac
agggagcatctgagacccctcaagatagccgaggtacttgaaatggaggatgagggtgag
gaggtagatgttgtgggtaggatattcagcctcagcgacccgagggaatttgagaggcag
gatgggaccggtatcgtgaggtcaatggaacttgcagatgagacaggcaagataagggtc
agcctctgggatgagaaggcagaaaaacccctgaatgtgggggatgcggtgagaatagag
aatgcccgaataagactggggctttacagcgtggaactcaacacaggaagaacaaccagg
atagtggaacccctcccagaggatattgagaacctgccctcctttgaggagcttgaggag
atgctctacaccacaaagaagatcgatgaacttgaggaggacgacaggaacataaggata
attgcgagggtggttgatctctttgatcccagggagttccagaggggtgacgggacaccc
ggccttgtgagaaccgttgaatttgctgatgacacaggatccataagggcaagcctctgg
gatgatgccgcggagaaaccactgagcatcggagatgcggtgagaatagaaaacccccgc
gtaatctacagggatgatatgggcggagagagacttgaactcagcataggtagaaattca
aggattgaaccggcaactgaaagggatatcagagggttaccctcatttgaggagctccag
gagatcctatatccacttgtaaacattgaggatcttcaggaggattcaagaaatgtcatg
ataaagggtgaacttacagaaatgtcaggcaggagaattctatccataaagtgcccatca
tgcaacgagaggcttgaactctctgacgagaacatctgtaacttctgcggcgcccttgtg
gatgaaccacgatacctcctcatgatccctggaaggatcatggatgataccggcgaggtc
ctcataacattctttggaagggaggctgaaaaactcctgggtatgtccacgagggaggtt
gttgatatcataaaccagtctgcagatgaatcagcacttgaggagagggttgaggacctt
aacggcgtcactgtggaggttatcggaaacgcggattttgatgaatacaatgaggaaccg
aggtttatacccagaaaggttgtgaatattgaactttaa
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