Methanothermobacter sp. THM-2: FZP68_02315
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Entry
FZP68_02315 CDS
T07724
Name
(GenBank) DNA lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
metj
Methanothermobacter sp. THM-2
Pathway
metj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
metj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FZP68_02315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metj03400
]
FZP68_02315
Enzymes [BR:
metj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FZP68_02315
DNA repair and recombination proteins [BR:
metj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FZP68_02315
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
OGG_N
HHH
Motif
Other DBs
NCBI-ProteinID:
QHN07693
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All DBs
Position
462305..463234
Genome browser
AA seq
309 aa
AA seq
DB search
MDIPVREFDLELTQESGQTSQPPWKRVDGAFRELLIIGGVPCPVEVRAGDEVLRVNPYSD
VPRKPLKKKIEYIFDLKFEIEDLYSFLEDKGLSDTIQSSRGLRLFLAKDPFECIISSIAS
ANCSIKRWTRAVDDIKRGWGDCHLFRGERFYTFPSPATLAGVEEESLEDLQRREDKLPDD
FRFTDLRSCGVGYRAPYIRETSRILSEELDISTIHRMDYPDALEVLLELPGVGPKVADCI
LLYGFRKTEAFPVDVWVRRIMNHLYPDRNFSAREIAEFAAREYGEMAGYVQLYLFNHARR
SGLLEKLRG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggatatacctgtaagggaattcgaccttgaactgacccaggagagcggccagacatcc
cagccaccatggaaaagggttgacggcgccttcagggagctcctcataatcgggggagtg
ccctgccctgtggaggtgagggctggggatgaagtcctcagggtgaacccctactctgat
gtccccagaaaacctttaaagaagaagatagagtacatattcgaccttaaatttgaaatt
gaagatttatacagttttcttgaggataaagggctctcagacaccattcaatcatcaagg
gggctgaggctattccttgcaaaggatccatttgagtgcataatctcatccatagcctct
gccaactgctccattaagagatggacgagggcagtggatgacatcaaaagggggtggggt
gactgccacctattcaggggggagcggttctacaccttcccatcccctgccacccttgca
ggggttgaggaggaatcacttgaggaccttcagaggcgcgaggataaactacccgatgat
ttcaggttcactgacctcaggtcatgtggggtgggctacagggccccatacataagggag
acctcaaggatactctctgaggaacttgatatcagcacaatccacaggatggactacccg
gatgccctggaggtcctccttgaactgccaggggtcgggccgaaggtggctgactgcata
ctcctttatgggttcaggaagaccgaggccttccctgttgatgtgtgggtgaggaggata
atgaaccacctgtaccctgatagaaacttcagtgccagggagattgccgaatttgcagcc
cgcgagtacggtgaaatggctggttacgttcagctctacctcttcaaccatgcaaggagg
tcagggctacttgaaaaactcaggggctaa
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