Methanothermobacter sp. THM-2: FZP68_04460
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Entry
FZP68_04460 CDS
T07724
Symbol
rpoA1
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
metj
Methanothermobacter sp. THM-2
Pathway
metj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
metj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FZP68_04460 (rpoA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
metj03021
]
FZP68_04460 (rpoA1)
Enzymes [BR:
metj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FZP68_04460 (rpoA1)
Transcription machinery [BR:
metj03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
FZP68_04460 (rpoA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
QHN08051
LinkDB
All DBs
Position
841349..843961
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AA seq
870 aa
AA seq
DB search
MALKKISQINFGLMSPEDIRKMSVTQVVTPDTYDEDGYPIENGLMDPRLGVIDPSLRCRT
CGAKGGECPGHFGSINLAKPIIHVGFADTIHKILRSICRKCGRVLLTEVEIEEYRQRILE
AMEKEESLTPIIEEIYTEARREKCPHCEEEQEEIKLDKPVSIVEGDYKLTPSEVRERLEK
ITDDDALILGVNPEVARPEWMVLTVLPVPPVTVRPSITLETGERSENDLTHKLVDILRIN
QRLKENMEAGAPQLIVEDLWELLQYHVTTYFDNDAAGVPPARHRSGRPLKTLAQRLKGKE
GRFRSNLSGKRVNFSARTVISPDPNISINEVGVPEIIAREVTVPVYVTEWNIDRMREYIE
NGPDVHPGANYVIRPDGRKIRISTKNRKIITGNLKPGYIVERHLKDGDIVLFNRQPSLHR
MSMMAHEVRVLPYKTFRLNPCVCPPYNADFDGDEMNMHVLQTQESIGDARTLMIVQEHFL
SPRFGGPIIGSINDHTSGLYLLTKNAEFDEEDALQLLKRAGIPLPSREGRKWSGKEIFSL
ILPDDLNTTFKVDSCKKCKECLEEECEHDAYVIIRNGELKAGVIDKDACGAFSGKLLNKI
IREYGAKKAGEFLESSMRLALTFLMKTGFTVSIRDFEITENAEDMITEELRIAESRIDQM
VDAYENGTLELLSDKSPEVTLEIEIMDILRNARETSEKIVENYLGMDWNHAFIMTRTSIK
CSMINLTQISAFLGQQSVRGGRISRGYNKRTLPHFRKGEISAKSRGFIHSSYMKGLDPIE
FFFHAIGGREGLVNKEIRSSQSGYMQRRLVNALQDLKVNEDEKVVDNRGFIIQTRFGEDG
VDPAKSDYGKIVDLDRLVEEIRISSKSKFS
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggcattaaagaaaatttcccagataaattttggtctcatgtcccctgaggatataagg
aagatgtccgttacccaggtcgtgacaccggacacctatgacgaggacgggtaccccatc
gagaacgggctcatggacccaaggcttggtgtcatagaccccagcctcaggtgcaggaca
tgcggggccaagggtggtgagtgccccgggcactttggaagcataaaccttgcaaaaccc
attatacacgtggggttcgcggatacaatacacaagatcctcaggtcaatctgcaggaaa
tgcggcagggtcctgcttacagaggtggagattgaagagtacaggcagcggatacttgag
gcgatggagaaggaggagagcctcacacccataatagaggaaatatacacagaggccagg
cgcgagaagtgcccccactgtgaggaggaacaggaggaaataaaactggataaacccgtc
tccatcgttgagggtgactacaagctaacacccagcgaggtgagggagaggcttgagaag
ataaccgacgacgacgcactcatcctcggagtcaaccccgaggttgcaaggcccgaatgg
atggtcctcacagtccttccggttccacctgtaactgtgagaccatcaataacccttgaa
accggtgaaagatcagagaacgacctgacccacaaactcgtggatatcctcaggataaac
cagcgcctcaaggagaacatggaggcaggggcaccccagctaatcgtcgaggacctctgg
gaactcctccagtaccacgtgacaacctacttcgacaacgatgccgctggtgtccctcct
gcaaggcaccgctctggcaggcccctcaagaccctagcccagaggctcaagggtaaggag
gggcggttcaggagcaacctctcaggaaagagggttaacttctctgcccgtacagtcatc
tcaccggaccccaacataagcataaacgaggtgggagtccctgagatcatagccagggag
gtcacagtaccggtctacgttacagaatggaacatagaccgcatgagagaatacatagag
aacgggcccgacgtacacccgggagccaactacgttataaggccagacggccgcaagata
aggatctccaccaagaacagaaagattattactgggaacctgaaaccaggttacatcgtt
gaaaggcacctcaaggatggtgacatagtcctgttcaaccgtcagccgtcactccacagg
atgtccatgatggcccatgaggtccgcgtcctaccctacaagaccttccgtctgaacccg
tgcgtctgccccccatacaacgcagacttcgacggggacgagatgaacatgcatgtactc
cagactcaagaatcaataggagatgcaaggacacttatgatcgtccaggagcattttctg
tcaccaaggtttggcggtcctatcataggttctataaatgatcatacctcaggtttatat
ctgctgacaaaaaatgcggaatttgatgaagaggatgcactccagctactaaaaagggct
ggaataccattaccatccagagagggtaggaaatggagtgggaaagaaatattcagcctt
atactccctgatgatcttaacacgacctttaaggtagactcatgcaaaaaatgcaaggaa
tgtcttgaagaggaatgtgaacatgatgcttatgttataataagaaatggagagctcaag
gccggagtaattgataaagacgcttgcggagcattttcaggtaaattgcttaataaaata
ataagagaatacggtgcaaaaaaggcaggcgaatttctggaatcctcaatgaggctggca
ctaacattcctgatgaaaacaggattcacagtaagcatcagggattttgagattacagag
aatgccgaagatatgataactgaagagctcagaatagcagagtcaagaattgaccagatg
gttgatgcatatgagaacggaacgcttgaacttctgtctgataaaagccctgaggtgacc
ttggagatagaaataatggacatccttcggaatgcaagggaaacctcagaaaaaatagtg
gaaaactacctgggaatggactggaatcatgcattcataatgaccagaaccagtattaag
tgctccatgatcaacctcacacagatatcagcctttctggggcagcagtcagtgaggggt
ggtcgaataagcagaggatataataagagaacacttccccacttcaggaagggagaaatc
agtgcaaagtcccgtggattcatacactcaagctacatgaaaggcctagaccccatagaa
ttcttcttccacgctataggtggaagggaaggccttgttaataaagaaattcgctcttca
cagagcggttacatgcagaggcgtcttgtaaacgccctccaggacctcaaagtcaacgag
gacgagaaggtcgttgacaacaggggatttataatacagacaagatttggtgaggacggc
gttgaccctgctaagagcgactacggaaagatcgtggaccttgacagattagtggaggaa
ataaggatctcttctaaatcgaagtttagttag
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