Methanothermobacter sp. THM-2: FZP68_04475
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Entry
FZP68_04475 CDS
T07724
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
metj
Methanothermobacter sp. THM-2
Pathway
metj03420
Nucleotide excision repair
metj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
metj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FZP68_04475
03430 Mismatch repair
FZP68_04475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metj03400
]
FZP68_04475
Enzymes [BR:
metj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FZP68_04475
DNA repair and recombination proteins [BR:
metj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FZP68_04475
MMR (mismatch excision repair)
Other MMR factors
FZP68_04475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
AAA_11
AAA_12
Cas_Cas4
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QHN08054
UniProt:
A0A6B9TIF2
LinkDB
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Position
complement(853530..856280)
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AA seq
916 aa
AA seq
DB search
MTGSLCRKGEACTENQKRAVKKTDGPLVIVAGPGAGKTRVLVERTAYLVKRKGVSPENIL
VITFTEKAADELKSRLINCVGLDAELMQISTIHSFCSTILREHPEEHDLGAGFEILDEES
QLMFLRSVFYRIGLNSFMKMGEVHEAIEFFNRCTENCVDPDELMEALKKRYPDKKRYHGM
AACYSQYLKALREEKKIDFPGLEKEVCLLLKSNEDVLESVRNKYRYIMIDEYQDTSPIQE
RIFRRIAEPKSSICVVGDEDQSIYGFRGATPENFIRFRDKYDAEVVFLEDNFRSRAGIVL
TADRFMRGERHYQKTIKPVRGGGTDVVILRSRDVNSEARNIVSLIKKLKSTGKIPDYGYV
ALLFRSVRYHADKILRELRREGIPYIVRGDGSFLKRYEVRRMLYFLAYVDPPDYDDKFSG
RWGGWWNISMFRGDFLDLGEETLEALESLERDVKLSDFTSIQELEAAGIRGEDAEKILGL
NRIRDELEQGSLSVLQTFYRILEVTGYLRRLLLDGSDKSRARIFNLAKLSSLIDKYETIK
PGARIQDILWYLYLLPQHLHHDEAVLEDPASVKVMTVHQAKGLEFPVVFICSVIKGRFPG
IKRRRKELVPIPQELLLSSGEPEDEDRRLFYVAMTRAQDALIISTAPRINTRKVGISPYI
TELREKCGIYECECTSIEGCLEREWAEEPLRINFSALFTYEECPFRYMMIYHYGFVYPET
FMQRYGIILHRCLEELHLAMKNSEDINGAFIRELVERCWIPMGRDDEVKKRRLERELLNY
YHDSRDHIEEVVSVEEPFSIPDDDIIIEGRTDLIIRNSGGELELVDFKAREHGGIERMGL
EYQLRTYEYALRDRYNFDRLSAYAIRDSMRMSFDSDPNFTVRERIEETVQKIRSECFEPR
RNQFCSRCVFRNFCGV
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgacaggatcactctgcaggaaaggggaggcgtgtacagagaaccagaagagggccgtt
aagaagaccgacgggccacttgtaattgtggcaggacctggtgccgggaaaacaagggtt
cttgttgagaggacagcttaccttgttaaaagaaagggggttagcccggagaatatactt
gttataaccttcacagagaaggccgcagatgagttgaagtcaaggctcataaactgcgtt
ggactggacgccgaactcatgcagatatcaaccatacactcattctgcagcaccatactg
agggagcaccccgaggaacatgaccttggagccggatttgagatcctggacgaggagtcc
cagctgatgttccttagatcagtcttctacaggatcggcctgaacagcttcatgaagatg
ggtgaggtccatgaggcaatcgaattcttcaacaggtgcaccgagaactgcgtggaccct
gacgaactcatggaggccctcaaaaaacgttaccctgataagaagagataccatggcatg
gcagcctgctacagccaatacctgaaggcactaagggaggagaagaagatagacttccca
ggacttgaaaaggaggtttgcctcctccttaaatcaaacgaggatgtccttgaatctgtc
agaaataaatacaggtacataatgatcgacgagtaccaggacacaagtcccatccaggag
aggatattcaggaggatagcagaacccaaatcaagcatatgcgtcgttggggatgaggac
cagagcatctacgggttcaggggcgccacccccgagaacttcataaggttcagggacaaa
tacgatgcagaggtggtgttccttgaggacaacttcaggtcaagggccgggatagtgctc
acagccgacaggttcatgaggggggagcggcactaccagaaaaccataaagcctgtgagg
ggcggcggaacagacgtggtgatactcaggagccgtgatgttaactccgaggcccggaac
atagtatccctgataaagaaacttaaatccacaggcaaaatccccgactatggatatgtt
gcacttctattcaggagcgtgcgctaccatgcagataagatactgagggagctcagaagg
gaggggatcccctacatagtccgcggtgacgggtcattcctcaaaaggtacgaggtaagg
aggatgctctacttcctggcctacgtggacccccctgattacgacgataaattcagtgga
agatggggtggctggtggaacatctccatgttccggggcgacttccttgatctgggtgag
gaaacactggaggcccttgaatcccttgagagggatgtgaaactctcggatttcacctca
atccaggaactcgaggctgcgggtatcaggggtgaggatgcagagaagatactcggcctc
aacaggatcagggatgaacttgaacagggctcactgagtgtcctccagaccttctaccgg
atactggaggtgacaggttacctcagaagactcctccttgatggtagtgacaagagcagg
gcaaggatattcaaccttgcaaagctcagttcactcatagacaagtacgagaccataaag
ccgggggccaggatacaggacatcctctggtacctctacctcctcccccagcacctccac
catgacgaggccgtcctggaggacccggcatcagtgaaggtgatgacagtccaccaggca
aagggtcttgagtttccggttgtgttcatctgctcggtcataaagggaaggttccctggt
ataaagagaaggagaaaggaactggtgcccatcccccaggaactgcttctctcatctggg
gaacccgaggatgaggaccgtaggctcttctacgttgcaatgacgagggcacaggacgcg
ctaatcatctccaccgcacccagaatcaacacaaggaaggtggggatctcaccatacatc
accgagttaagggagaagtgcgggatatacgagtgtgagtgcacatccattgaggggtgc
cttgagagggagtgggcagaggaacccctgaggatcaacttctcggccctcttcacctac
gaggagtgccccttcaggtacatgatgatctaccattacggctttgtctaccctgaaaca
ttcatgcagcgctacggtatcatactccacaggtgcctcgaagagttacaccttgcaatg
aagaattcagaggatataaacggggcattcataagggaacttgttgaaaggtgctggata
cccatggggagagacgatgaggtgaaaaagaggcgccttgaaagggaactcctcaactac
taccatgacagcagggaccatatagaggaggttgtctcggtggaggagccattctccata
cccgacgatgatataataatagagggtcggaccgacctcatcatcaggaactctgggggt
gaactggagcttgtggacttcaaggcccgggaacatgggggtattgagaggatggggctc
gaataccagctccggacctatgagtatgcactgagggacagatacaattttgacaggctc
tctgcatacgcaataagggactccatgaggatgtcatttgactccgaccccaacttcact
gtgagggagaggatagaggagacagttcagaaaataaggagtgagtgcttcgagccccgc
aggaatcagttctgctcaaggtgtgtgttcaggaacttctgtggggtatag
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