Methanothermobacter sp. THM-2: FZP68_05815 Help Entry FZP68_05815       CDS       T07724                                  Name (GenBank) CDC48 family AAA ATPase   KO K13525   transitional endoplasmic reticulum ATPase Organism metj  Methanothermobacter sp. THM-2 Pathway metj04141   Protein processing in endoplasmic reticulum Brite KEGG Orthology (KO) [BR:metj00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     FZP68_05815  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:metj03019]     FZP68_05815    03009 Ribosome biogenesis [BR:metj03009]     FZP68_05815    04131 Membrane trafficking [BR:metj04131]     FZP68_05815   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:metj04147]     FZP68_05815 Messenger RNA biogenesis [BR:metj03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Ran-mediated transport factors      FZP68_05815 Ribosome biogenesis [BR:metj03009]  Eukaryotic type   Pre-60S particles    Ribosome quality control proteins     FZP68_05815 Membrane trafficking [BR:metj04131]  SNARE   SNARE associated proteins    Others     FZP68_05815  Autophagy   Aggrephagy    Other aggrephagy associated proteins     FZP68_05815 Exosome [BR:metj04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    FZP68_05815 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA AAA_lid_3 CDC48_N AAA_2 AAA_16 CDC48_2 RuvB_N TIP49 AAA_14 AAA_22 AAA_33 AAA_5 AAA_lid_PRS2_C nSTAND3 NPHP3_N Sigma54_activat Zeta_toxin AAA_28 RNA_helicase Mg_chelatase AAA_3 AAA_7 ABC_tran ATPase IstB_IS21 NB-ARC DUF815 TsaE Viral_helicase1 SLFN-g3_helicase AAA_18 AAA_24 Parvo_NS1 PhoH AAA_11 ATP-synt_ab Vps4_C Motif Other DBs NCBI-ProteinID:  QHN08294 UniProt:  A0A6B9TJ26 LinkDB All DBs Position complement(1128424..1130613) Genome browser AA seq 729 aa AA seqDB search MAEKEIKLKVAEALAQQDVGRGIARVDPACMEKLGLSDGDIIEIEGKKLTAATVISSQSD IGLGIIRIDGYLRKNAGASIGEEVTVRRAEVKDAQKVVLAPVDQEVIIRGDIRSAFLNRV LVKGDIIVSGIRQQISGGGLFDEFFRDFMDLSPLGEIKLAVVSTSPAGVVRVTPTTQVEM QSKPVDVSKLEGVKNLVDVTYEDIGGLKEEVKKVREMIEIPLKRPELFERLGITPPKGVL MHGPPGTGKTLLAKAVANESDAHFIAINGPEIMSKYVGGSEERLREFFEEADENAPSIIF IDEIDAIAPKREDVSGEVERRIVAQLLTLMDGLKSRGQVVVIGATNRPDALDPALRRPGR FDREIEIGVPDREERKEILQIHTRGMPLAEDVDLDELAEITHGFVGADLESLCKESAMRV LRRVLPEIKADEEIPKEVLKKMIVTRADFKEALKEVQPSALREVLVQVPNVSWEDIGGLE DAKQELREAVEWPLKYPDRFKKFGIKPPKGILLHGSPGTGKTLLAKAVANESQANFIAVK GPELLSKWVGESEKGVREVFRKARQTAPTVIFFDEIDSIASVRSGSTADSGVTQRVVNQL LTEIDGLEELQDVAVIAATNRPDILDPALLRPGRFDRHVKVDDPDREARLAIFKVHTKDM PLADDVNLEKLADKTEGYVGADIEAVCREAAMLTLRENMDAEDVPMKHFLEAMEKIKPKG GVEEQVQYH NT seq 2190 nt NT seq  +upstreamnt  +downstreamnt atggcagaaaaggaaataaaattaaaggttgcagaggccctcgcccagcaggacgttggt agaggtatagcccgtgtggaccccgcatgcatggaaaaactgggtctctccgatggagac ataatcgaaatagagggtaaaaaactgaccgctgcaaccgtcatatcatcacagtccgac ataggcctcggaatcataaggatagacggatacctccgtaaaaatgcaggggcatccatc ggcgaagaggtgacagtgagaagggcagaggtaaaggacgcccagaaagtcgtcctggca cccgttgaccaggaggtgatcatacgtggagatataagatcagcattcctcaacagggtc ctcgtcaagggggacataatcgtatcagggataaggcagcagatatccggtggagggctc ttcgatgagttcttcagggacttcatggacctctcacccctgggggaaataaaactcgca gtcgtatcaacaagccccgcgggtgtcgtgagagtcacgcccacaacccaggtggaaatg cagtcaaaacccgttgacgtcagcaaactggagggcgtgaagaacctagtcgacgttaca tacgaggacatcggaggcctcaaggaggaggtcaaaaaggtcagagagatgatagagatc cccctcaagaggcccgaactcttcgagaggctcggcataacaccaccaaagggtgtcctc atgcatggaccaccaggtacaggtaagacactcctcgccaaggcagtcgccaacgaaagc gacgcccacttcatagccataaacggtcccgaaataatgagcaaatacgttgggggatca gaggagagactaagggaattcttcgaggaagcagatgaaaacgcgccatccatcatattc atagacgaaatagatgcaatagcacccaaaagggaggacgtgagtggcgaggttgaaagg agaatagttgcccagctcctcaccctcatggacggcctgaaaagcaggggccaggttgtg gtcataggtgcaaccaacagaccagacgccctagaccctgcactcagaagacccggcaga ttcgaccgtgaaatcgaaataggcgtccctgacagggaggaaagaaaggagatactccag atacacacccggggtatgccactggcagaggacgttgacctggatgaacttgcagagata acccacggctttgtgggcgcagacctggaatcactctgtaaggaatccgccatgagagta ctgaggagggttctgcctgagataaaggccgatgaggagatacccaaagaggtcctcaag aagatgatagtcacaagggcagacttcaaggaagccctgaaagaggtgcaaccatcagca ctcagggaggtccttgtacaggtgcccaacgtctcatgggaggacataggtggactggag gacgccaaacaggaactcagggaggctgtggagtggcccctcaagtaccccgacaggttc aagaaattcggcataaaaccgccaaagggtatcctgctgcatggatcaccaggtacaggt aagacactcctcgccaaggcagtcgccaatgagagccaggcaaacttcatagccgtgaag ggccctgaactcctctcaaaatgggtgggcgaatctgagaagggtgttcgtgaagtcttc aggaaggcccgtcagacagcgccaaccgtgatcttctttgatgagatagactcaatagcc tcagtgagaagtggaagcactgcagactcaggggtgacccagcgtgtcgtgaaccagctc ctcacagagatcgatggacttgaggagctacaggacgttgctgtgatagccgcaaccaac aggccagacatcctggaccctgcgctcctccgacctggaagattcgacagacacgtgaag gtcgacgatccagacagggaggcaaggctcgccatattcaaggtgcacaccaaggatatg ccgcttgcagatgacgtgaaccttgaaaaactggcggataagacagaaggatacgttggt gccgacattgaagccgtctgcagggaggccgccatgctgacactcagagagaacatggac gcggaggatgtcccgatgaaacacttccttgaggccatggaaaaaataaaaccaaagggt ggcgttgaggaacaggttcagtaccattaa

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