Methanothermobacter sp. THM-2: FZP68_07960
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Entry
FZP68_07960 CDS
T07724
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
metj
Methanothermobacter sp. THM-2
Pathway
metj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
metj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FZP68_07960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
metj03019
]
FZP68_07960
03009 Ribosome biogenesis [BR:
metj03009
]
FZP68_07960
Enzymes [BR:
metj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FZP68_07960
Messenger RNA biogenesis [BR:
metj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FZP68_07960
Ribosome biogenesis [BR:
metj03009
]
Prokaryotic type
rRNA helicases
FZP68_07960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Cas3-like_C_2
Utp25_C
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QHN08659
UniProt:
A0A6B9TKW0
LinkDB
All DBs
Position
complement(1494991..1496268)
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AA seq
425 aa
AA seq
DB search
MKELKFSEFDISGEINRALDDMGFEGTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAI
PLLENLEPERVPQALVICPTRELCLQVTDEIRRIGKYLNVRVLAVYGGQGIGGQIAELRR
GVHVIVATPGRLIDHIERGTVDLGGISTVVLDEADEMLNMGFIEDIERILSHVPERRQTM
LFSATISKPVLRIAERYMRSPQILRVEKKHSPRIDEFYFKTREEDKVELLDWILTSNDIR
MGLIFCNTKRRVQRLRKQLSRMGYSVDEIHGDLSQSKRERVMERFRKGRFNLLIATDVTA
RGIHVPDVEVVVNYDLPFENEYYVHRIGRTGRAGSSGKSFTLVVGREVHRLRRIQSFTGK
RIKKSNMPSPQEIRRGYEEELVEVLRRNLKSKSYGDSELLGNLVSEGYSFRDISHALLDV
LESSK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattgaaattcagtgaatttgatatctcaggggagattaacagggcccttgat
gatatgggatttgagggtacaaccccaatccaggcacttacattacctgttacacttgat
ggtatggacgtcgttggggaggcccagaccgggaccgggaaaaccgcagcctttgccata
ccactgcttgagaaccttgaaccagagagggtcccccaggcacttgtgatctgccctacc
cgtgaactctgtctgcaggtcaccgatgagataaggaggataggcaagtaccttaatgtg
agggtgcttgcggtctatggtggccagggtattggaggtcagatagccgagctcaggagg
ggcgtccatgttatcgtcgcaacaccaggaaggctcatagaccatatcgagaggggtact
gtggaccttggaggtatatccacggtcgtgcttgatgaggcagatgagatgctcaacatg
ggcttcatagaggacatagagaggatactatcccacgtccctgaaaggagacagacaatg
ctgttctctgcaaccatctcaaagccggtgctaaggatcgcagagaggtatatgagaagc
ccccagattctccgtgtagagaaaaagcacagccccaggatagatgaattctatttcaaa
accagggaggaggacaaggttgagctccttgactggatactgacatccaatgacatcaga
atgggcctcatattctgcaacaccaaaaggagggttcagaggctcagaaagcagcttagc
cgtatgggttactctgtggatgaaattcacggagatctatcacagtcaaagcgtgaacgt
gtcatggaacgcttcaggaagggaaggttcaacctcctcattgcaactgatgttactgca
cggggtatacatgtgcccgatgtggaggtcgttgtcaactatgatcttccattcgagaac
gagtactatgttcacaggatagggcgtaccgggcgtgccggttcaagtggaaaatccttt
acactggttgttggaagggaggtccacaggttaaggcgaatccagtcctttacaggtaaa
aggataaagaagagcaacatgccatccccgcaagagataaggaggggttacgaggaggaa
cttgtggaggtgctccgtagaaaccttaaatccaagagttacggtgactccgagctcctg
ggaaaccttgtgagtgagggttacagtttcagggatatctcacatgcccttctggatgtt
ctggagtcctcaaaatag
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