Methanothermobacter sp. KEPCO-1: FVF72_01470
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Entry
FVF72_01470 CDS
T06317
Name
(GenBank) DHH family phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
metk
Methanothermobacter sp. KEPCO-1
Pathway
metk03410
Base excision repair
metk03430
Mismatch repair
metk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
metk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FVF72_01470
03430 Mismatch repair
FVF72_01470
03440 Homologous recombination
FVF72_01470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metk03400
]
FVF72_01470
DNA repair and recombination proteins [BR:
metk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FVF72_01470
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FVF72_01470
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FVF72_01470
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH_CID
DHH
Motif
Other DBs
NCBI-ProteinID:
QEF93942
UniProt:
A0A5B9M118
LinkDB
All DBs
Position
302352..303749
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AA seq
465 aa
AA seq
DB search
MNMDELEGALRRARKLIEEAETVTVYSHTDCDGITAATILSKLLEGLGKDHEISIININE
VPEVEHGPDLTVFSDLGSGQMVHENMKRSSRVLILDHHPPLRKRNFEPPRGELLEINPIF
YGMDGSTSISGGGLSYLLARQFGYTNLSWMGLLAAVGDMQNIRTGKMVGANRVILEDSIM
EGAVECCSDLTIYGRHTRSIVSALSYFGDVTLPTTNNTNECIARLKNLGIPLKNDETQRR
LCDLTDDEKRKLFNEIYRMMVNEVPRRYHKYLPRLILGEVYELRSEERYTVFRDLSEFST
AVNACNRNSKWKLAMDIIGGDRHEKLEELEDVLREHRAYLAVTLDRIMDEELIRDMDNLQ
YFHAPGVKTAVVGTVAGMLLGYGDWRRPMIGLAETGDGLKVSLRCSRLLAFDGIHFGSIM
QRVAEKVGGSGGGHATACGAYIPSENEEEFLRLLNRAIEKVKVNG
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggacgaacttgaaggtgcgctcagaagggcccgtaagctgattgaggaggct
gagacggttacagtctacagccacacagactgtgatggtataacagcggcaacaatcctc
agcaaactccttgagggtctcgggaaggaccatgagatcagcataataaacatcaatgag
gtccctgaggttgaacatggtccggatctcacagttttcagtgaccttggatccggacag
atggtccatgaaaacatgaaaaggagctcccgtgtgctcatactcgaccaccatcccccc
ctccgaaagagaaactttgaacctccacggggtgagctccttgaaataaatccaatcttc
tatggaatggatggttcaaccagcatctcaggtgggggcctatcatatctccttgcaagg
cagtttggatacaccaatctcagctggatggggctccttgccgcggtgggtgacatgcag
aacatcaggaccggtaagatggttggggccaaccgggtgatcctggaggacagtataatg
gagggtgcggttgagtgctgcagtgaccttacaatctacggtagacacaccagatccatc
gtaagtgcactctcctacttcggggatgtcaccctgccaacaacaaacaacaccaacgag
tgcatagcaaggcttaagaacctgggcatacccctgaaaaacgatgaaacccagaggagg
ctctgtgatcttacagatgacgagaaaaggaaactcttcaacgagatataccgtatgatg
gtcaacgaggtccccagaaggtaccataaatacctccccaggctcatactcggtgaggtc
tacgagttaagatcagaggagaggtacacggtattcagggacctctcagagttctcaacc
gcagttaacgcgtgtaaccggaactcaaagtggaagcttgcgatggatatcatcgggggt
gatcgccatgaaaagctggaggaacttgaggatgtcctcagggaacaccgggcctacctt
gcggttaccctcgaccggataatggacgaggaactcataagggatatggataatctccag
tacttccacgcccccggcgtgaaaaccgctgtggtgggtacggttgcaggtatgctcctg
ggctacggtgactggaggaggcccatgataggccttgctgaaaccggcgatggcctcaag
gtttcactgaggtgctcccgcctacttgcatttgacggcatacacttcggttcaatcatg
cagagggtggctgagaaggttgggggtagcggcggtggtcatgcgactgcctgcggagca
tacataccctctgagaatgaggaagaattcctcagactccttaacagggccatagaaaag
gttaaggtgaatggatga
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