Methanothermobacter sp. KEPCO-1: FVF72_03440
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Entry
FVF72_03440 CDS
T06317
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
metk
Methanothermobacter sp. KEPCO-1
Pathway
metk04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
metk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
FVF72_03440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
metk03019
]
FVF72_03440
03009 Ribosome biogenesis [BR:
metk03009
]
FVF72_03440
04131 Membrane trafficking [BR:
metk04131
]
FVF72_03440
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
metk04147
]
FVF72_03440
Messenger RNA biogenesis [BR:
metk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
FVF72_03440
Ribosome biogenesis [BR:
metk03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
FVF72_03440
Membrane trafficking [BR:
metk04131
]
SNARE
SNARE associated proteins
Others
FVF72_03440
Autophagy
Aggrephagy
Other aggrephagy associated proteins
FVF72_03440
Exosome [BR:
metk04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FVF72_03440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_2
CDC48_2
AAA_16
RuvB_N
TIP49
AAA_22
AAA_14
AAA_33
AAA_5
AAA_lid_PRS2_C
nSTAND3
NPHP3_N
Zeta_toxin
Sigma54_activat
AAA_28
RNA_helicase
Mg_chelatase
AAA_3
ATPase
AAA_7
ABC_tran
IstB_IS21
NB-ARC
DUF815
Viral_helicase1
TsaE
SLFN-g3_helicase
AAA_24
AAA_18
Parvo_NS1
Bac_DnaA
PhoH
ATP-synt_ab
AAA_11
Vps4_C
Motif
Other DBs
NCBI-ProteinID:
QEF94292
LinkDB
All DBs
Position
632262..634451
Genome browser
AA seq
729 aa
AA seq
DB search
MAEKEIKLKVAEALAQQDVGRGIARVDPACMEKLGLSDGDIIEIEGKKLTAATVISSQSD
IGLGIIRIDGYLRKNAGASIGEEVTVRRAEVKDAQKVVLAPVDQEVIIRGDIRSAFLNRV
LVKGDIIVSGIRQQISGGGLFDEFFRDFMDLSPLGEIKLAVVSTSPAGVVRVTPTTQVEM
QSKPVDVSKLEGVKNLVDVTYEDIGGLKEEVKKVREMIEIPLKRPELFERLGITPPKGVL
MHGPPGTGKTLLAKAVANESDAHFIAINGPEIMSKYVGGSEERLREFFEEAEENAPSIIF
IDEIDAIAPKREDVSGEVERRIVAQLLTLMDGLKSRGQVVVIGATNRPDALDPALRRPGR
FDREIEIGVPDREERKEILQIHTRGMPLAEDVDLDELAEITHGFVGADLESLCKESAMRV
LRRVLPEIKADEEIPKEVLKKMIVTRADFKEALKEVQPSALREVLVQVPNVSWEDIGGLE
DAKQELREAVEWPLKYPDRFKKFGIKPPKGILLHGSPGTGKTLLAKAVANESQANFIAVK
GPELLSKWVGESEKGVREVFRKARQTAPTVIFFDEIDSIASVRSGSTADSGVTQRVVNQL
LTEIDGLEELQDVAVIAATNRPDILDPALLRPGRFDRHVKVDDPDREARLAIFKVHTKDM
PLADDVNLEKLADKTEGYVGADIEAVCREAAMLTLRENMDAEDVPMKHFLEAMEKIKPKG
GVEEQVQYH
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaaggaaataaaattaaaggttgcagaggccctcgcccagcaggacgttggt
agaggtatagcccgtgtggaccccgcatgcatggaaaaactgggtctctccgatggagac
ataatcgaaatagagggtaaaaaactgaccgctgcaaccgtcatatcatcacagtccgac
ataggcctcggaatcataaggatagacggatacctccgtaaaaatgcaggggcatccatc
ggcgaagaggtgacagtgagaagggcagaggtaaaggacgcccagaaagtcgtcctggca
cccgttgaccaggaggtgatcatacgtggagatataagatcagcattcctcaacagggtc
ctcgtcaagggggacataatcgtatcagggataaggcagcagatatccggtggagggctc
ttcgatgagttcttcagggacttcatggacctctcacccctgggggaaataaaactcgca
gtcgtatcaacaagccccgcgggtgtcgtgagagtcacgcccacaacccaggtggaaatg
cagtcaaaacccgttgacgtcagcaaactggagggcgtgaagaacctagtcgacgttaca
tacgaggacatcggaggcctcaaggaggaggtcaaaaaggtcagagagatgatagagatc
cccctcaagaggcccgaactcttcgagaggctcggcataacaccaccaaagggtgtcctc
atgcatggaccaccaggtacaggtaagacactcctcgccaaggcagtcgccaacgaaagc
gacgcccacttcatagccataaacggtcccgaaataatgagcaaatacgttgggggatca
gaggagagactaagggaattcttcgaggaagcagaggaaaacgcaccatccatcatattc
atagacgaaatagatgcaatagcacccaaaagggaggacgtgagtggcgaggttgaaagg
agaatagttgcccagctcctcaccctcatggacggcctgaaaagcaggggccaggttgtg
gtcataggtgcaaccaacagaccagacgccctagaccctgcactcagaagacccggcaga
ttcgaccgtgaaatcgaaataggcgtccctgacagggaggaaagaaaggagatactccag
atacacacccggggtatgccactggcagaggacgttgacctggatgaacttgcagagata
acccacggctttgtgggcgcagacctggaatcactctgtaaggaatccgccatgagagta
ctgaggagggttctgcctgagataaaggccgatgaggagatacccaaagaggtcctcaag
aagatgatagtcacaagggcagacttcaaggaagccctgaaagaggtgcaaccatcagca
ctcagggaggtccttgtacaggtgcccaacgtctcatgggaggacataggtggactggag
gacgccaaacaggaactcagggaggctgtggagtggcccctcaagtaccccgacaggttc
aagaaattcggcataaaaccgccaaagggtatcctgctgcatggatcaccaggtacaggt
aagacactcctcgccaaggcagtcgccaatgagagccaggcaaacttcatagccgtgaag
ggccctgaactcctctcaaaatgggtgggcgaatctgagaagggtgttcgtgaagtcttc
aggaaggcccgtcagacagcgccaaccgtgatcttctttgatgagatagactcaatagcc
tcagtgagaagtggaagcactgcagactcaggggtgacccagcgtgtcgtgaaccagctc
ctcacagagatcgatggacttgaggagctacaggacgttgctgtgatagccgcaaccaac
aggccagacatcctggaccctgcgctcctccgacctggaagattcgacagacacgtgaag
gtcgacgatccagacagggaggcaaggctcgccatattcaaggtgcacaccaaggatatg
ccgcttgcagatgacgtgaaccttgaaaaactggcggataagacagaaggatacgttggt
gccgacattgaagccgtctgcagggaggccgccatgctgacactcagagagaacatggac
gcggaggatgtcccgatgaaacacttccttgaggccatggaaaaaataaaaccaaagggt
ggcgttgaggaacaggttcagtaccattaa
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