Methanothermobacter sp. KEPCO-1: FVF72_03980
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Entry
FVF72_03980 CDS
T06317
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
metk
Methanothermobacter sp. KEPCO-1
Brite
KEGG Orthology (KO) [BR:
metk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
metk03016
]
FVF72_03980 (truD)
Enzymes [BR:
metk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
FVF72_03980 (truD)
Transfer RNA biogenesis [BR:
metk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FVF72_03980 (truD)
Prokaryotic type
FVF72_03980 (truD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QEF94388
UniProt:
A0A5B9M1R4
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All DBs
Position
complement(748564..749811)
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AA seq
415 aa
AA seq
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MLNAETYVTSTEGIGGRIRVHNRDFQVEELPLMEPSGSGPNTWIWMEKEDRTTLDVLLDI
ARELHLDRRRMGFAGMKDRNAVTRQWICVSNTDPEDVKGIEDRIRNVRFLKVTSNEKKLR
MGQLRGNRFRILIRGPEADDPLEKTRETLAELQEKGVPNYYGWQRFGSPRAITHLVGRAL
VHGDVKGAVDTYIGNPIEGESELVSRARRAYDMGDLEGAYELMPASLRYERMMLRVLIRD
LGKGELSEKSYITAVHALPKPLKRMFVHAYQSYLFNRVVSERAALGINSYLEGDIIIDNE
QHIIHDPDPREVEEMIINFEAHPTAPLYGSKVPLADGKPGEIERRILEEEGVSLPDFNSI
EVPKLGSHGMRRAIRFRIWDVSAALNPEGIKVEFSIPKGCYATSVLREIMKKDVA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcttaacgcagaaacctacgtcacatcaacagaggggatcggtggaaggatccgggtg
cataacagggacttccaggttgaggaattaccgctcatggagccaagcggaagcgggccc
aacacctggatatggatggagaaggaggacagaacaaccctggacgtccttctggacatt
gcaagggaactgcacctggaccgaaggagaatgggattcgcagggatgaaggacaggaac
gcggtaaccaggcagtggatatgcgtcagcaacacagaccccgaggacgttaagggaata
gaggatagaataaggaatgtcagattcctcaaggtcacatccaatgaaaaaaagctcaga
atgggccagctaaggggtaacagattcaggattctcataaggggccctgaagctgatgac
ccccttgagaagacccgggagaccctggctgagcttcaggagaagggtgttccaaattac
tatggatggcagcgattcggaagccccagggcaatcacacacctcgttggcagggcactg
gtgcatggtgatgtgaagggtgcggtggacacctacattggaaacccaattgagggggaa
tccgagcttgtatcccgggcgagacgggcatatgatatgggggaccttgagggtgcatat
gaactcatgccggcctccctcaggtatgagaggatgatgctcagggttctcatcagggat
ctcggaaagggagaactctctgaaaagtcctatataaccgcggtacatgcacttccaaag
cccctcaagaggatgtttgtccatgcataccagtcctacctattcaacagggtggtcagt
gagagggcggctcttggcataaacagctaccttgagggtgacatcatcatagacaatgag
cagcacataatccatgacccggatccacgggaggtggaggagatgatcatcaactttgag
gcacacccaacagcgccactctacggtagcaaggtgccactggcagatggaaaacccggt
gagatcgagaggaggatactggaggaggagggtgtttcactccctgacttcaactccata
gaggtccctaagcttgggagtcatggcatgaggagggccataaggttcaggatatgggat
gtttcggccgccctaaaccctgagggaatcaaagtggagttttcaataccgaagggatgc
tatgcaacctctgttttaagggagataatgaagaaggacgttgcctga
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