Methanothermobacter sp. KEPCO-1: FVF72_06340
Help
Entry
FVF72_06340 CDS
T06317
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
metk
Methanothermobacter sp. KEPCO-1
Pathway
metk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
metk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FVF72_06340 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
metk03021
]
FVF72_06340 (rpoB)
Enzymes [BR:
metk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FVF72_06340 (rpoB)
Transcription machinery [BR:
metk03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
FVF72_06340 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Zf_2nd_IFT121
RNA_pol_Rpb2_45
DUF5817
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QEF94802
LinkDB
All DBs
Position
complement(1190611..1192422)
Genome browser
AA seq
603 aa
AA seq
DB search
MSKTKIYINGKLIGTCENPEEFVQEMREKRRSGEVSPEMNITHYPENHEIYIFTDPGRAR
RPLIIVREGEPLLKEEHLEKLESGEMEWDDLIKEGIIEYLDAEEEENAYIAMSPEDLTDE
HTHLEIDPSTMLGICAGIIPFANHNSSPRNTMEAGMTKQALGLYASNYDLRTDTRAHLLH
HPQVPIVKTRIIDVTGYDERPSGQNFVVAVMSYEGYNMEDALILNKASLERGLARSSFFR
SYEAAERRYPGGQEDRFEIPEKGVRGYRSESDYRHLDEDGIINPEAVVSSGDVLIGKTSP
PRFLEEIDEFGTVAERRRETSVTVRHGEKGIVDAVLLTETVEGSRLAKIRVREQRQPELG
DKFASRHGQKGVVGLIVSQEDMPFTEDGVVPDLIVNPHAIPSRMSVGQVLEMLAGKAACM
EGRRVDGTPFTGEDEGDIKKALRDNGFESAGVESLYNGITGERIEAEIFIGVAYYQKLHH
MTTDKVYARSRGPVQVLTRQPTEGRAREGGLRFGEMERDCLIAHGAALALKERLLDESDK
YEALVCTECGMIAIYDKIRDKKYCPICEDSESFPVEISYAFKLLLDELKSLCIFPKLILE
DKA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaaaccaagatttacattaacgggaaacttatagggacctgcgaaaaccctgaa
gaattcgtacaggagatgagggagaagaggagatctggagaggtctcacctgagatgaac
ataacccattaccctgaaaaccatgagatatatatattcacagaccctggaagggccaga
agacccctcatcattgtaagggaaggcgaacctcttttaaaggaggaacaccttgaaaag
cttgaatccggggaaatggaatgggatgacctcataaaggagggtataatagagtatctg
gatgccgaggaagaggaaaacgcctacatagcaatgagtccagaggacctcacagatgaa
cacacccaccttgagatagacccctccaccatgctggggatatgtgcaggtatcattcca
ttcgcaaaccacaactcatcacctaggaacaccatggaggcagggatgaccaagcaggcc
cttggtctctatgcatccaactacgacctcaggacagatacacgtgcacacctactccac
cacccacaggtccccatagtcaagacaaggataatagatgtgacaggctacgatgagagg
ccatcaggccagaacttcgttgtggccgtaatgtcctatgagggctacaacatggaggat
gcactgatactcaacaaggcatcccttgagaggggacttgcaaggtcatcattcttcaga
tcatacgaggccgcagagcggagataccccggtggtcaggaggaccgcttcgagataccc
gagaagggggtccggggctacaggtcagagagcgactacaggcaccttgacgaggacggc
ataataaaccccgaggcagtggtatcatccggtgacgtcctcataggtaaaacatcacca
cccaggttcctggaggaaatcgatgagttcggaaccgtggcagagcgtagaagagaaacc
tcagtaaccgttaggcacggtgagaagggcatagttgacgctgtgctcctgacagaaacc
gttgaaggcagcagactcgccaagataagggtgagggaacagagacagccagaactcggt
gacaaattcgcatcaaggcacggtcagaagggtgttgtgggcctcatagtatcacaggag
gacatgcccttcacagaggacggtgttgtgccagacctcatagtcaacccccatgccata
ccatcaaggatgtctgtggggcaggtccttgagatgctcgcaggcaaggccgcgtgcatg
gagggccgccgggtggacggaacaccattcaccggagaggacgagggggacataaagaaa
gccctcagagacaatggatttgaaagtgccggtgtggaatcactctacaacggaataacc
ggtgaaaggatagaggcggagatattcataggagtggcctactaccagaaactccaccac
atgacaacagacaaggtatacgcaagatcaaggggtcctgtacaggtcctcacaagacag
ccaaccgagggaagggccagggaaggaggtctcagattcggtgaaatggaaagggactgc
ctgattgcccatggagcagcgcttgcccttaaggaaaggcttcttgatgaatcagacaaa
tacgaagcactggtatgtaccgagtgcggtatgatagcaatctacgacaagataagggat
aagaagtactgtccaatatgtgaggactcagagtcattccctgtggagatatcatacgcc
ttcaaattactccttgatgagcttaagagtctatgcatcttcccgaaactcatactggaa
gacaaggcatga
DBGET
integrated database retrieval system
