Methanothermobacter sp. KEPCO-1: FVF72_06345
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Entry
FVF72_06345 CDS
T06317
Name
(GenBank) DNA-directed RNA polymerase subunit B''
KO
K03045
DNA-directed RNA polymerase subunit B" [EC:
2.7.7.6
]
Organism
metk
Methanothermobacter sp. KEPCO-1
Pathway
metk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
metk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FVF72_06345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
metk03021
]
FVF72_06345
Enzymes [BR:
metk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FVF72_06345
Transcription machinery [BR:
metk03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
FVF72_06345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
QEF94803
UniProt:
A0A5B9M6M7
LinkDB
All DBs
Position
complement(1192446..1193990)
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AA seq
514 aa
AA seq
DB search
MKKSAWGLVDAFFDKYDLVDHHIHSYNDFVSNRIQEIIDTSEPIELEQGKYRVETGKVSI
EKPFIKEADGSKSKIYPTEARLRNLTYSAHMSLEMRLIKEGGPETEFEKVYIGELPAMLK
SEICHLHGLSRNELIEKGEDPADPGGYFIVNGSERSIVTMEEIAPNKIILERIGEEDENR
ARAIVTSIRSGFRARISLEYRKPRKSGVFLRISFPYVPGELPLVILLRALGLATDQDIIT
SISDDFNYQMIAADDIQVSLDKLNLKKDEMEKLDEEGRREYLVRSAIRYIGNRVAKGMTE
DYRMKRAEDVIDRYLLPHIGTEPEKRLDKAIYLAEMTEMLLQVISGERKPHDKDHYTNKR
LRVSGDLMEDLLRVAFTSLSRDMSYQLERSLARGKEPSVKQAVRSDVLTENLKHAIATGN
WVGGRAGVSQLLDRTSYMGTLSHMRRVVSPLSRSQPHFEARDLHPTQFGKICPNETPEGP
NCGLVKNLALLAKISEGSDGRDVEEVIRKMGVLN
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagtgcatggggattggtagacgcgttttttgataaatacgaccttgtggac
caccacatacattcctacaatgacttcgtgagtaaccgtatacaggagataatcgacaca
agcgaacccatagagctggaacagggaaagtaccgtgtcgagacaggcaaggtgagcata
gaaaaacccttcatcaaggaggcagacggctcaaagagcaaaatatatccaacggaggca
agactcaggaatttgacctactcggcccacatgagcctcgagatgagactcataaaggag
gggggtcctgaaacagaattcgaaaaggtctacatcggggaactgcctgctatgctgaaa
tcagagatatgccacctgcatggcctcagcagaaatgaactcattgaaaagggcgaggac
ccggctgaccctggcggctacttcatagtcaacggttcagagagatcaatagtcaccatg
gaggagatagcccctaacaagataatacttgagaggatcggggaagaggatgaaaacagg
gccagggcaatagttacatctataagaagtggtttcagggccagaatatcccttgaatac
aggaagccccggaagagcggagtgttcctgagaatatcattcccatatgtccccggagaa
ctcccgctggtgatactgctaagggcccttgggcttgcaactgaccaggacatcataacc
agcatatcagatgacttcaactaccagatgatcgccgccgacgacatacaggtatcgctg
gacaagctgaacctcaaaaaggatgaaatggagaaactggacgaggaggggagaagggag
taccttgtaaggagcgccataagatacatcggtaaccgggtcgccaagggcatgaccgag
gactaccgcatgaaaagggctgaggatgtcatagaccgctacctcctcccccacataggg
acagaaccagaaaagaggctggataaggcaatatacctggctgaaatgaccgaaatgctc
ctccaggttatatccggtgagcggaagccccacgataaggaccactacaccaacaagagg
ctcagggtttcaggtgacctaatggaggaccttctgagggtggccttcacaagtctcagc
agggacatgagctaccagctggagagaagcctcgcaaggggtaaggagccctcagtcaaa
caggctgtgaggtcagatgtcctcacagagaacctcaaacacgccatagcgacaggtaac
tgggttggtggaagggcaggtgtgagccagctcctggatcggacaagttacatgggtaca
ctatcccatatgagaagggttgtctcccccctcagcaggagtcagccacacttcgaggca
agggaccttcacccgacacagttcggtaagatctgccccaacgagacccctgagggtcca
aactgtggtcttgttaagaacctcgccctccttgcaaagatatccgagggttcagatgga
agggatgttgaggaagtgatcagaaaaatgggggttctgaactaa
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