Methanothermobacter sp. KEPCO-1: FVF72_08940
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Entry
FVF72_08940 CDS
T06317
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
metk
Methanothermobacter sp. KEPCO-1
Pathway
metk03420
Nucleotide excision repair
metk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
metk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FVF72_08940
03430 Mismatch repair
FVF72_08940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metk03400
]
FVF72_08940
Enzymes [BR:
metk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FVF72_08940
DNA repair and recombination proteins [BR:
metk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FVF72_08940
MMR (mismatch excision repair)
Other MMR factors
FVF72_08940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
AAA_12
AAA_11
Dna2
AAA_22
AAA_16
ResIII
FeoB_Cyto
Motif
Other DBs
NCBI-ProteinID:
QEF95264
UniProt:
A0A5B9M7S4
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All DBs
Position
1666374..1669133
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AA seq
919 aa
AA seq
DB search
MGGEIQLTDEQRRAVEHFTGPMLVVAGPGAGKTRIIVERVAHLIEKRGVDPGSLVVITFT
KKAADELKERILGRVGSRAEEMQISTIHSFCNRILRMYPDHHPLGSHFHVLDEEKQLMFI
YDHREELGLRHTPRERFLKIQTFFSECQENMIEPEALLEYHRSHGSKRMEIVAAKAYGKY
LKLMEEKRVLDFSGMQWQVVKLLESDEEVLEDLRTRYRFLMVDEYQDTNPIQERFLELLA
GDGKNIFAVGDEDQSIYGFRGSTPENFLGFEDKYDAEVVMLERNFRSVPSIVDITQRFME
GYRDYPKTIKPVRNSKNRVFILDNPTHQDEPRNIVSIIRALVDHNVVPHQGYVTLLFRSV
KHDAGEIMNELRREGMPFNVYGEGGFFDREEILYIIQLLHHTRSIRRRIIKKLSPENTEH
FESDFMDITGESIEIIRNMDEEDLRSFRTHEEFREAGFTHQDDIEKLVALNRLIDSELGV
LERYYEILEISRYPHRLLERGDDESREKLYNLARFSSIIKDYERVSSEPTVEGLMEFVRM
AMTGSVKKYDQILLDNPYSVNVMTMHRAKGLEFPVVIICSVFNGKLPRKNRDEQEDLSIP
DELRKSTGRGDVLEERRLFYVGMTRAQDMLIISATENHRGRLGYSPFIEDLLSASRITSD
KLGRIDPEYARIEVIKNTCEVGDIESMETFRMSFTELNTYLTCPFRYMMLYEYGFDVPST
RNQLYGMAVHECLRRINRRLMRGEVITDGYIHELASETLRDLNLSREAFDAFKSKLKRYI
EDIRSRAARIISAEKPFSIMRDGFMLTGQTDLIIENPNGGLELVDFKAMTGEGIEATDIS
LQLGLYRHALEEDFDGFLAYTFEDSEWHEIEPLDDVEAVLIEVAGRVRREEFPARKNDFC
RWCTFHSICEHVAGLYGTL
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgggaggggagatccagctcacagatgaacagcgcagggctgtggaacacttcaccggc
cccatgctggttgttgcagggccaggggccgggaagaccaggatcatagttgagagggtg
gcccatctcatagagaaaaggggggttgatccaggaagcctcgtggtgataaccttcaca
aagaaggctgccgatgagctgaaggagaggatactggggcgtgtgggttcaagggcagag
gagatgcagatatccaccatacactcattctgcaaccgcatactccgcatgtaccctgac
caccaccccctgggttcccacttccatgtcctggatgaggaaaaacagctcatgttcatc
tacgaccacagggaagaacttggattgaggcacacaccccgggaacgatttcttaaaatc
cagacctttttcagtgaatgccaggagaacatgattgaaccggaggccctgctggaatac
caccgctcccatggttcaaaaagaatggaaatcgtcgctgcaaaggcatatggtaaatac
ctcaaactcatggaggaaaagagggtcctggacttctcagggatgcagtggcaggtcgta
aaacttcttgaaagtgatgaggaggtcctcgaggacctcaggacaaggtacaggttcctc
atggttgacgagtaccaggacaccaaccccatacaggagaggttcctggagctccttgca
ggtgatggaaaaaacatattcgcagttggggatgaggaccagagcatctacggcttcagg
ggatccacgccagagaacttcctgggcttcgaggacaagtacgatgcagaggttgtgatg
cttgagaggaacttccgctcagtacccagcatagtggacatcacccagaggttcatggag
gggtacagggactacccaaagaccataaaacccgtgaggaactcaaaaaacagggtcttc
atccttgacaaccccacccaccaggacgagccacgcaacatagtcagcataataagggcc
cttgttgatcacaatgtggttccccatcagggatacgtgacactcctcttcaggagtgtc
aaacacgatgcaggcgagataatgaatgaactcagaagggagggaatgcccttcaacgtt
tacggcgagggcggattctttgacagggaggagatactctacatcatacagctcctccac
cacacaaggagtataaggaggaggataatcaagaaactgagccctgaaaataccgagcat
ttcgagagcgacttcatggatataacgggtgaaagtattgagataatcaggaatatggat
gaagaggacctcagatcattcagaacccatgaagaattcagggaagctggattcacccat
caggatgacatcgaaaaactcgtagccctcaacagactcatagacagtgaactcggcgtc
cttgagaggtactatgagatccttgagatcagcaggtacccccacaggctccttgagagg
ggtgatgatgagtcaagggagaaactctacaaccttgcaaggttcagttcaataatcaag
gactatgagagggtgtcatcagagcccaccgttgagggcctcatggagtttgtgaggatg
gcgatgacaggaagcgttaagaagtacgaccagatcctccttgacaacccatactcggtc
aatgtcatgaccatgcacagggcaaagggccttgagtttcccgttgtcataatctgttct
gtcttcaatggaaaactaccaaggaagaatagagatgaacaggaggacctcagcatccct
gatgaactcagaaagagtactggaagaggtgatgtacttgaggagagacggctattctat
gtgggaatgacaagggcccaggacatgctcataatctctgcgacagagaaccacagggga
agactggggtattcaccattcatagaggaccttctctcggcttcaaggataacaagcgat
aagctggggaggatagaccctgaatatgccaggatagaggtcataaagaacacctgtgag
gtgggggatattgaatccatggagaccttcaggatgagcttcacagaactcaacacctac
ctcacgtgcccattcaggtacatgatgctctatgagtacggcttcgatgtcccgtcaacc
aggaaccagctctatggtatggcggtccatgagtgcctcaggaggataaacaggcgcctc
atgaggggtgaggtcataaccgatggctacatacatgagctggcatcagaaaccctcagg
gatctgaatttaagcagggaggcgtttgatgccttcaaatcaaaactgaaacgctacatt
gaggatataaggtcccgtgcagccagaataatctctgcagagaaacccttcagtataatg
agggatggcttcatgctgacaggtcagacagacctcatcatagaaaaccccaatggcgga
ctggaactcgttgacttcaaggcaatgacaggggaaggtatagaggcgactgatatctct
cttcagcttggactctacaggcacgcccttgaagaggactttgatggcttccttgcctac
acctttgaggattcagagtggcatgagatagaaccactggatgatgttgaagcggttctc
attgaggttgccggtagggtgaggagggaggaattccctgcaaggaagaacgatttctgc
aggtggtgcaccttccactccatatgtgagcatgtagcagggctctatgggaccctttag
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