Methylomonas sp. LW13: U737_00285
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Entry
U737_00285 CDS
T05879
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
metl
Methylomonas sp. LW13
Pathway
metl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
metl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
U737_00285 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
metl03019
]
U737_00285 (rhlB)
Enzymes [BR:
metl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
U737_00285 (rhlB)
Messenger RNA biogenesis [BR:
metl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
U737_00285 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Thioredoxin_8
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QBC25470
LinkDB
All DBs
Position
complement(70275..71615)
Genome browser
AA seq
446 aa
AA seq
DB search
MKKTHLTETRFSNLELSDSIIKGLKEAGFINCTPIQDKSLPLSLRGKDIAGQAQTGTGKT
ATFLLATFQHLINDESEKIKNPRALILAPTRELAIQIHKDAVALSKYLNLKFALIYGGTD
YQKQLDKIKGNVDIIIGTPGRIIDFYRQGAFTLDNIQVTVMDEADRMFDLGFIKDIRFLL
RRMPPAEKRLNMLFSATLSYKVTELAYEHMNNPVLIRIESEEVTSKAINQVAYCPANEQK
IPLLLGLLKHHQPQRSIVFVNTKRCAEQLDDYLAANGHKVAMLSGDVPQEKRQRLLNDFQ
ENRVTLLIATDVAARGLHIPDVSHVFNYDLPQDVEDYVHRIGRTARFGASGEAISFICEE
YAYSMPDIEDYIGEKVPVQSITPELMVEEVIKPQRREPRERVMPRDKRPPRSEHKPREHR
PPRPAPTTNQASTPENPPPPQTQQPA
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaacacatttgacggaaacacgttttagcaatttggagctgtccgactccatc
attaaaggtctgaaagaagcaggattcatcaactgcacacccattcaggataaatccttg
cccttgtctttacgcggcaaggacattgccggccaagcccaaaccggcaccggcaaaact
gccacatttttgctggcgacttttcagcacctgatcaacgacgaaagcgaaaaaatcaag
aacccgcgcgcgctgattctcgctccaacccgcgagctggcgatccagattcacaaagac
gcggtggctctgagcaagtatctgaatctgaagtttgcattgatctacggcggtaccgac
tatcaaaagcagttggataaaatcaagggcaatgtcgacatcattatcggcacaccgggc
cgcattatcgatttctaccggcaaggcgccttcactttggataacatccaggtcaccgtg
atggacgaagccgaccgcatgttcgatttgggctttattaaagacatccgcttcctgctg
cgccgcatgccgccggcagaaaagcgtttgaatatgctgttttccgctacgttgtcttat
aaagtcaccgaactggcttatgagcacatgaacaacccggtgctgattcgtatcgaatcc
gaggaagtgacttccaaagccatcaatcaggtggcttattgtccggccaatgagcaaaaa
atcccgctattactgggtttgctgaaacatcaccaaccgcagcgcagcatcgtcttcgtc
aacaccaaacgctgtgccgagcaactggacgattacctggctgccaacggccataaagtg
gctatgctcagcggcgacgtgccccaggaaaagcgccagcgcctgcttaacgatttccag
gaaaaccgggtcacgctgctgatcgctaccgacgtggcggcgcgcggcctgcacattccg
gacgtatctcacgtgttcaactacgacttgccgcaagacgtcgaagattatgtacatcgg
attggccgtactgcccgtttcggcgccagcggcgaggcgatcagttttatttgcgaggaa
tacgcttactcaatgccggacattgaggattacatcggtgagaaagtgccggtgcaaagc
atcacgccggaattgatggtagaagaagtgatcaagccccaacgccgcgagccgcgcgaa
cgggtcatgccgcgcgacaaacgcccgccgcgttcagagcacaagcccagagagcaccgg
ccgccccgccccgctcccactacaaaccaggcatcaacgcccgaaaatcctccaccgcca
caaactcagcaacctgcttaa
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