Methylomonas sp. LW13: U737_01990
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Entry
U737_01990 CDS
T05879
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
metl
Methylomonas sp. LW13
Brite
KEGG Orthology (KO) [BR:
metl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metl03400
]
U737_01990
Enzymes [BR:
metl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
U737_01990
DNA repair and recombination proteins [BR:
metl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
U737_01990
Prokaryotic type
U737_01990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QBC25782
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Position
complement(445965..447488)
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AA seq
507 aa
AA seq
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MSYNLVWFKRDLRVHDHAPLLYASRNAPVLCLFIIEPSLWAADDVATQHYQFLRESLLDL
DIALRKRGGGLRIEVGEALEVLDRLWQEAPFLAVYSHQETGNWLSFQRDLAVQRWCRARS
LKWYEFAQFGVVRRLQNRDLWKAHWEALMAEPCLEPPSSDWLAAPQPPILPDPQALGLLQ
PDLPLRQLGGRRQGIETLRDFLFARCNSYRGGISSPLSAPTACSRLSAYLAFGCLSLREI
VQATRRQLAALPRGDARRAGLTAFISRLYWHCHFMQKLESEPELEFTNLHRGYDGLREAD
WNPVHFQALSAGQTGWPLVDACVAMLQQTGWLNFRMRAMLVSVASYPLWLHWQPVGTWLA
RQFLDYEPGIHWSQMQMQAGTTGINTTRVYNPIKQARDHDPHGHFVRHWLPALRSVPKEW
LFEPWRMPVKLQQQCGVRVGVDIAEPLVDLESATRQAKTRLYQVRGRADVKAAKAAIVEK
HGSRKQPTRRRPTQAAAGDWVQTQLDF
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgagctacaacctggtctggttcaagcgcgatctgcgggtacacgaccatgcaccgctg
ctttacgccagccgcaacgcgccggtgctgtgtttgttcatcatcgaacccagcttgtgg
gcggccgacgacgttgccacgcaacactaccaatttctacgcgaaagcctgcttgatttg
gacatagccttgcgtaaacgcggcggcggtttgcgtatcgaagtgggcgaggcgctggaa
gtattggaccggctttggcaggaagcgcccttcctggctgtgtattcgcatcaggaaacc
ggcaactggctgagctttcagcgcgacttggccgtgcaacgctggtgccgggcgcgcagc
ttaaaatggtatgaatttgcgcaattcggtgtggtgcggcgcttgcaaaatcgagacttg
tggaaagcgcattgggaagcgctgatggcggaaccctgcctggaacctccctcttctgat
tggctagcagcacctcaaccgccgatcttgcccgatccgcaagctctgggcttacttcag
cccgacctgccgctaagacaactgggcggccgccgccaaggcatcgaaaccttgcgcgat
tttctattcgctcgttgcaactcttaccgaggcggcatctcctcgcccttgtccgcacca
acggcctgttcgcggctttctgcttatttggccttcggctgtttgagtttacgggagatc
gtgcaagccacccgccgccagttggctgctttaccgcgcggcgatgcccgtcgtgccggt
ttgacggccttcatcagccgcttgtattggcattgccacttcatgcaaaagctggagagc
gaaccggaactggagtttaccaatctgcatcgcggctatgacggcctgcgcgaagcggac
tggaatccggtgcattttcaggccttaagcgcaggccagacgggttggccgttggtcgat
gcctgtgtggcgatgctacagcaaaccggttggctgaacttccgcatgcgggcgatgctg
gtatcggtagcgagttatccgctgtggctgcattggcaaccggtcggcacttggctggcc
cggcagtttctggattacgaacccggcatccactggagccagatgcaaatgcaggccggc
accaccggcattaacaccacgcgggtgtataacccgatcaaacaggcccgcgaccatgat
ccgcacggccattttgtcagacattggctgccggccttacgcagcgtgcccaaagaatgg
ctattcgaaccctggcggatgccggtaaaactgcaacaacaatgcggcgtgagggtcggt
gtggatattgccgaaccgctggtcgatctggaatccgctacccggcaggccaaaacccgt
ctttaccaagtgcgaggccgcgccgacgtgaaagccgccaaggcggctatcgtcgagaaa
cacggctcgcgaaagcagcccacccgccgccgaccaacccaagccgcagccggcgactgg
gtacaaacccagctggatttttaa
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