Methylomonas sp. LW13: U737_07270
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Entry
U737_07270 CDS
T05879
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
metl
Methylomonas sp. LW13
Brite
KEGG Orthology (KO) [BR:
metl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
metl03000
]
U737_07270
Transcription factors [BR:
metl03000
]
Prokaryotic type
Helix-turn-helix
Other families
U737_07270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
PAS
AAA_5
PAS_8
PAS_9
HTH_8
PAS_4
AAA_2
AAA
Mg_chelatase
nSTAND3
PAS_10
AAA_16
AAA_30
AAA_3
TIP49
AAA_7
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QBC26723
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Position
1606916..1608703
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AA seq
595 aa
AA seq
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MTHKRQRDKPLILMLDDNPVNLEELAGLVDEAGFDVLRAETGEIALVQAVAQLPDLILLD
VLMPGMDGFTVCQTLKTIPTTRDIPVLFMTALADTADKLKGFQVGAVDYITKPFQYEEVL
ARVQTHLTLQKLKLELQEKEQRLSRIFENAMDAILTLDDIGRITLFNAAAEQMFRCKAAD
SIGRAVDRFLSPELYKTLTNFRNGVPAEQAIWVSEGMSAVRADESTFPIEATISRVEAIG
QKLYILILRDINERKARQQAEAECNTLRGINLYLQEEVLASRDGEELIGNSPALHQAMDL
VRQVANTDATVLITGETGTGKELIARAIHNLSARKDKTLVKLNCATIPENLAESELFGHE
KGSFTGAIARKLGRFELANGGTLFLDEIGELPLEMQAKLLRVLQEGEFERVGGTQTLTCD
VRVIAATHRDLAQFSQQGKFRADLYYRLNVFPINLPPLRERKEDVPFLVKHFIDKYAAKF
GKKIQSIPERMMADLQSYFWPGNIRELQHIIERAVILTKGSQLAAVDCVNVMGAGGAPNA
APIVTLDEAERAHILKALEATSWRIAGNQGAAKILGVPSTTLRSRMEKLGISKPA
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgactcataagcgccagcgcgataaaccgttaatcttgatgctggacgacaatccggtt
aacttggaagagttggcaggcttggtcgatgaagccggctttgacgtattgcgtgcggaa
acgggcgaaattgccttggtccaagccgtggcccaattgccagacctgattctgttggac
gtgctgatgccgggcatggacggttttaccgtctgccagaccttgaaaaccattccgacg
acgcgcgatattccggtgttattcatgacggccttggcggataccgccgataaattaaaa
ggttttcaagtcggggcggtggattacatcaccaagccgtttcaatacgaagaagtactt
gcccgcgtgcaaacccatctgacgctgcaaaagttgaagctggagttgcaagaaaaagag
cagcgcctgtcgcggattttcgagaacgcgatggatgcgattctgacgctggatgacatc
gggcggattaccttattcaacgcggcggccgaacagatgtttcgctgcaaagccgccgac
agcattggccgggcggtggatagatttttgtcgcccgagctttacaaaacgctaaccaat
tttcgcaacggcgtgccggccgagcaggccatttgggtgtcggaaggcatgagtgcggta
cgcgcggatgagagcactttccccatcgaagccaccatttcccgcgtggaagccattggg
cagaaactgtatatcctgattttgcgtgacatcaacgaacgtaaagcccggcaacaggcc
gaagcggaatgcaataccttgcgcggcatcaatctatatctacaagaagaagtcttggcc
agccgcgatggcgaggaattgatcggcaattctccggcattgcatcaagcgatggatctg
gtcaggcaggtagccaacaccgacgcaacggtgttaatcaccggtgaaaccggtaccggc
aaggaattgattgctcgggcgattcacaatctcagcgctcgcaaagacaaaaccttggtg
aaattgaattgcgcgacgatcccggaaaatctcgccgaaagcgagctgttcggtcacgaa
aagggctcgtttaccggggcgattgctcgcaaattgggacgttttgaactggctaacggc
ggtaccttgtttctggatgaaatcggcgaattgccgttggagatgcaggccaaattattg
cgggtgctacaggaaggcgaattcgaacgggtgggcggcacgcaaaccctgacctgcgat
gtgcgggtcatcgccgccacccatcgggatttggcgcagttttcgcaacaaggtaaattc
cgggccgacttgtattaccgtttaaatgtgtttcccattaatttgccgccgctacgcgag
cgtaaggaagacgtgccgtttttggtgaagcatttcatcgataagtacgcggcaaaattc
ggcaagaaaattcagtctattccggaacggatgatggctgatctgcaaagttatttctgg
cccggcaatattcgcgagctgcaacatatcatcgaacgtgcggtgattttaaccaagggc
agtcaactggccgccgtggattgcgtgaatgtgatgggggccggcggcgcgcccaacgcg
gcaccgattgtcacgctggacgaagccgagcgcgcgcatattttgaaagcgctggaagcc
acgtcctggcgaatcgccggtaatcagggagcggcgaagattttgggggtgccatccacg
actttgcggtcgcggatggaaaagctggggattagtaaaccggcctga
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