Methylomonas sp. LW13: U737_07775
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Entry
U737_07775 CDS
T05879
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
metl
Methylomonas sp. LW13
Pathway
metl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
metl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
U737_07775 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metl03400
]
U737_07775 (xth)
Enzymes [BR:
metl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
U737_07775 (xth)
DNA repair and recombination proteins [BR:
metl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
U737_07775 (xth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QBC26808
LinkDB
All DBs
Position
complement(1704891..1705667)
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AA seq
258 aa
AA seq
DB search
MLRIISANLNGIRSATRKGFYDWLDTQNPDFVCLQELKAQAGDMTAEMLTPKGLHGYFHY
AEKKGYSGVGIYSKQPADNVIEGLGHADIDSEGRYLEVQVGNLSVISLYLPSGSSSEERQ
TVKYSVMERFYPHLADLKASGREVVICGDWNIAHTEADLKNWRGNQKNSGFLPAERSWMT
QIYDELGWVDVYRRLHPDATDACYTWWSNRGQAWAKNVGWRIDYQVATPGIANRAQSTSI
FKEQRFSDHAPLIVDYAD
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgctccgcatcatctccgccaatctaaacggcattcggtcggcaaccagaaaaggtttt
tacgactggttagacacccaaaatccagacttcgtctgcctacaagaacttaaagcccag
gccggcgatatgacagccgagatgctgacaccgaaaggcctgcacggctattttcattat
gccgaaaagaaaggctacagcggcgtcggtatctacagcaaacagccggccgataacgtc
attgagggcttgggccatgcggacatcgatagcgaaggccgctatctggaagtgcaagtc
ggcaatctatcggtcatttccctgtatctgccttccggctccagtagcgaagagcgacaa
accgtcaaatacagcgtgatggaacgcttctatccgcatcttgccgacttgaaagccagc
ggccgggaagtggtcatttgcggcgactggaatatcgcccatacggaagccgatttgaaa
aactggcgcggcaaccagaaaaactccgggtttttaccggctgaacggtcctggatgacc
caaatatatgatgagctcggctgggtagatgtttatcgcagactacatcccgacgctacc
gacgcctgctacacgtggtggagcaatcgtggccaggcttgggccaaaaatgtcggttgg
cgaatcgattaccaagtcgccacgccgggtatcgccaatcgtgcacagtcaaccagcatt
tttaaagagcaacgcttcagcgaccatgcgccattgatcgttgattacgcagactag
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