Methylomonas sp. LW13: U737_08215
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Entry
U737_08215 CDS
T05879
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
metl
Methylomonas sp. LW13
Pathway
metl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
metl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
U737_08215 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
metl03019
]
U737_08215 (pnp)
03016 Transfer RNA biogenesis [BR:
metl03016
]
U737_08215 (pnp)
Enzymes [BR:
metl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
U737_08215 (pnp)
Messenger RNA biogenesis [BR:
metl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
U737_08215 (pnp)
Transfer RNA biogenesis [BR:
metl03016
]
Prokaryotic type
tRNA degradation factors
U737_08215 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
KH-I_KHDC4-BBP
DUF6160
KH_2
S1_2
SPATA25
Motif
Other DBs
NCBI-ProteinID:
QBC26890
LinkDB
All DBs
Position
1801841..1803919
Genome browser
AA seq
692 aa
AA seq
DB search
MNPIRKQFQYGDRLVTLETGEIARQANGAVIIDVEGTTLLVTVVGKKESSGGDFFPLTVD
YQEKAFAAGKIPGGFFKREGRPSENETLISRLIDRPIRPLFPEGFTNEVQIIATVLSLNP
EIDTEAPAIIGASAALAVSGLPFNGPLGAATIGYIDGQYVLNPTLPQLKESRLRLMVAGT
SKAVLMVESEADVLPEDVMLGAVLFGHEQMQVAINAINEFAAEAAAPAITWTAPADNEAL
KAAVAAEAEAQIKSAYQIPEKLARQDTLSAIRSAVVEKLTAEDLYGEKDIRNVIETLEYN
VVRGAILNDRKRIDGRDLTTVRPITIRTGVLPRTHGSALFTRGETQALVVATLGTERDAQ
IIDALAGEYKDTFLFHYNFPPFSVGETGRTGSPKRREIGHGRLAKRGVQSVLPNMGEFPY
VLRVVSEITESNGSSSMASVCGSSLALMDAGVPIKAPVAGIAMGLIKEGDQFAVLSDILG
DEDHLGDMDFKVAGSENGVTALQMDIKIDGITAEIMKVALEQAKQGRLHILGEMNKALSS
TRSEMSDFAPRIITFKIDPAKIREVIGKGGVTIRAITEATGASIDLTDDGVVNVASVDRA
AGEEARRMIEEITAEVEVGKTYEGKVVRLMDFGAFVTILPGKDGLVHISQISDERVEKVS
DKLSEGDVVKVKVLEIDRQGRVRLSMKEVDSE
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcctatcaggaaacaatttcagtacggcgatcgtctcgtcaccttagaaaccggc
gaaattgcccgccaagccaacggcgcggtaatcattgatgtcgaaggtaccactctgttg
gtgaccgtggtcggcaaaaaagaaagcagcggtggcgactttttcccgctgacggtggat
tatcaggaaaaagcctttgccgcgggtaaaattcctggcggctttttcaaacgcgaaggc
cgcccaagcgaaaacgaaacgctgatctcgcgcctgatcgaccgtccgatccgtccgttg
tttcccgaaggcttcactaacgaagtccaaatcattgccaccgtgctgtccttgaatccg
gaaatcgataccgaagcgccggccatcattggtgcgtccgctgcgttggcggtgtccggt
ttgccgtttaatggcccgctgggcgccgcaaccatcggctatatcgatggccaatatgtg
ctgaaccccacgttgccgcaactgaaggagtcgcgtttgcgcctgatggttgccggtacc
tccaaagccgtattgatggtagagtccgaggccgatgtgctaccggaagacgtgatgctg
ggcgcggtattgttcggccacgagcaaatgcaggttgcgatcaatgcgatcaatgaattt
gctgcggaagcagctgcaccggcaataacctggacagcacctgcggataacgaagccttg
aaagccgctgttgccgctgaagccgaagcgcaaatcaaatcggcctatcaaattccggaa
aaactggccagacaggacaccctgagtgcaatccgtagcgccgtcgtcgaaaaattgacc
gccgaagatctttacggcgaaaaagacatccgcaacgttatcgaaaccttggaatacaat
gttgtgcgcggtgcgattctgaacgaccgcaaacgtatcgacggccgcgacctgaccact
gttcggccaatcacgatccgtaccggcgtgctacccagaacccacggttcggcgctgttc
actcgcggcgaaacccaagccttggttgttgcgaccttgggcaccgagcgcgacgcgcaa
atcatcgatgccctggccggcgaatataaagatactttcctgttccattacaacttccca
ccgttcagcgttggcgaaaccggccgcacaggctcgccgaagcgccgtgaaatcggccac
ggccgtttggccaagcgcggcgtgcaatcggtgttgccgaacatgggcgagttcccttac
gtcctgcgcgtcgtatcggaaatcaccgaatccaacggttccagctccatggcgtctgtc
tgcggtagcagcttggccttgatggacgccggcgtgccgatcaaagccccagtagccggt
atcgcgatgggtctgatcaaggaaggcgatcaatttgcagtattgtccgacatcctgggc
gacgaagaccacttgggcgatatggactttaaagtggccggttccgagaacggcgtcacc
gcgttgcaaatggacatcaagatcgacggtatcaccgccgaaatcatgaaagttgcgctg
gaacaagccaaacaaggccgtctgcacattttgggtgagatgaacaaagccttgtccagc
acacgttccgaaatgtcagactttgctccgcgcattatcaccttcaaaatcgatccggct
aaaatccgcgaagtcatcggtaaaggtggcgtgactattcgcgccattaccgaagccact
ggcgccagcattgatttgaccgacgacggcgtggtcaatgtagcgtctgtcgatagagcg
gcgggcgaagaagccagacgcatgatcgaggaaatcaccgccgaagtcgaagtgggcaaa
acctacgaaggcaaagtggtgcgtttgatggacttcggtgcgttcgtgaccattctgccg
ggcaaggacggtttggtgcatatttcgcaaatctccgacgaacgtgtggaaaaagtcagc
gacaaactgtcggaaggcgatgtcgttaaagtcaaagtactggaaatcgaccgtcaaggc
cgcgtacgcttgagcatgaaagaagtcgatagcgaataa
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