Methylomonas sp. LW13: U737_09045
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Entry
U737_09045 CDS
T05879
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
metl
Methylomonas sp. LW13
Pathway
metl02020
Two-component system
metl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
metl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
U737_09045
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
U737_09045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
metl03000
]
U737_09045
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
metl02035
]
U737_09045
Transcription factors [BR:
metl03000
]
Prokaryotic type
Helix-turn-helix
Other families
U737_09045
Bacterial motility proteins [BR:
metl02035
]
Flagellar system
Flagellar assembly proteins
Others
U737_09045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
FleQ
HTH_8
AAA_5
AAA_16
bpMoxR
AAA
AAA_2
HTH_50
AAA_7
TIP49
nSTAND3
LSDAT_euk
GlnR_1st
Motif
Other DBs
NCBI-ProteinID:
QBC27041
LinkDB
All DBs
Position
1993627..1995042
Genome browser
AA seq
471 aa
AA seq
DB search
MALPEILLIDDNTHRSQQVEGILRFLEYRVEVVASSDFEAAFRDHDSFGAVFVGCGGDKQ
ASLIKTVTESVGDIPVVLLVDAGGPQVVSAIQQMVNKTLEWPTVYPLLIQLLDSLPQPAQ
ASKKSLPDKGLAGKSKAIQKTRAQIDQVAKSDATVLILGESGTGKEVVAQALHRASARRD
RPFVPVNCGAIPGELLESELFGHEKGAFTGALTSRQGRFEMAEGGTLFLDEIGDMPMPMQ
VKLLRVLQERTFERVGSNKTIHCDVRIIAATHRHLEQEIAEKRFREDLFYRLNVFPIEVP
ALRERAEDIPYLINDLIARMEAANRGTVSLSPRAIATLMQHSWPGNVRELSNLIERLAII
SPDASVDVSDLPEKFQGYEVPEGVQIVLPEQDIHIVRPAEREALAMPTPGAVAAVHLPEQ
GIDLKEYLTDLENELIRQALEECNGVVAHAAKLLNMRRTTLVEKLRKTDTA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggctttgccagaaattttgctcattgatgacaacacccaccgcagtcagcaagtagaa
ggcatactccggtttttggaatatcgcgtggaggtggttgccagtagcgattttgaagcg
gcgtttagagatcatgacagtttcggtgcggtatttgtcggctgcggcggagacaagcaa
gccagcttgatcaaaacggtcaccgaaagcgtcggcgacattcctgtggttttgctggtg
gacgccggtgggccgcaggtggttagcgccattcagcaaatggtcaataaaaccttggag
tggccgactgtctacccgctattgatccaactattggacagtttgccgcagcctgcgcaa
gccagtaaaaaatcgctgcctgataagggtctggcgggtaaaagcaaagccattcaaaaa
acccgtgcgcagatcgatcaagtcgccaaatccgacgccacggtgcttatcctcggcgaa
tccggcacaggtaaggaagtggtggcgcaagcgctgcatcgtgcctctgcgcggcgagac
aggccattcgtgccggtcaattgcggcgctattcccggtgaactgctggaaagcgaattg
ttcggccacgagaagggtgcatttaccggcgcgttgacttcgcggcaaggtcgtttcgaa
atggcggaaggcggtacgctgtttttggatgaaatcggcgacatgccgatgccgatgcag
gttaaattgttaagagtattgcaggaacgcactttcgaacgtgtcggcagtaataaaacc
atccattgcgatgtgcggattattgccgcgacgcatcgtcacctcgaacaggaaattgcc
gagaagcgctttcgagaggatttgttctaccgtctgaatgtgttcccgatcgaagtgcca
gccttgcgggaaagagccgaagatattccttatttaatcaacgacctgattgcccgcatg
gaagccgccaaccggggcaccgtcagtttatcgcctcgcgcaatcgccaccttgatgcaa
cacagttggcccggtaatgtccgcgagttgtcaaatttgatcgagcgtttagccatcatt
agtccggatgctagtgtcgatgtcagtgatttaccggaaaaatttcagggctatgaagta
ccggaaggcgtgcagattgtattgccggagcaagatattcacattgtgcggcccgctgag
cgtgaagcgctggcgatgccgactcccggtgcagtcgcggccgtgcatttacccgaacaa
ggtatcgatcttaaggaatatttgaccgatctcgagaacgaattgattcgtcaggctttg
gaagaatgcaatggcgttgtagcgcatgccgccaaattgctgaatatgcgcagaaccacg
ctcgtggaaaagctgcgcaaaaccgatacggcttag
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