Methylomonas sp. LW13: U737_09605
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Entry
U737_09605 CDS
T05879
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
metl
Methylomonas sp. LW13
Brite
KEGG Orthology (KO) [BR:
metl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
metl03021
]
U737_09605 (rpoH)
Transcription machinery [BR:
metl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
U737_09605 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_25
Motif
Other DBs
NCBI-ProteinID:
QBC27137
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Position
2121485..2122339
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AA seq
284 aa
AA seq
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MNNSLALPINLSVGTFDSYLSLISQMPKLSVEQEQDLALRYRDEGDLNAARELVMSNLRF
VAHVARGYAGYGLPLADIVQEGNIGLMKAVKRFDPDMGVRLVSFAVHWIKAEIHEYVIKN
WRIVKVATTKAQRKLFFNLRKFKKDLSYLSQDDAEAIAENLDVDVKTVYEMERRLDGRDV
GLEPSGDDSEDHVQAPIAYLEQHGADPALLLENSDWEDRKEELLMDAMDSLDDRSRDILA
SRWLVEDKATLHELADRYQVSAERIRQLEQNAMKKLKAAVSLAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatagcttggctttaccgatcaatttatcggttgggacgtttgattcttattta
agcctgatatctcaaatgcccaaactcagcgttgagcaggagcaagacctggcgttgcgt
taccgggatgaaggcgatctgaacgccgcgcgcgagctggtgatgtctaatctgcgtttt
gtggcgcatgtggccagaggctatgccggttacggcttgccattggcggacattgtgcag
gaaggcaacatcggcttgatgaaagcggtaaaacgtttcgacccggacatgggcgtgcgt
ctggtgtcttttgccgtacattggatcaaagctgaaatccacgaatatgtgatcaaaaac
tggcgcattgtcaaagttgcgacgaccaaagcgcagcgcaaactgttttttaatctgcgt
aaattcaaaaaggacttgagctatctctcgcaagacgatgcggaagcgattgcggaaaac
ctggatgtcgatgttaaaaccgtttacgaaatggaacggcggttggacggtcgcgatgta
gggcttgagccgagtggcgacgacagcgaagatcatgtgcaagcgcctatcgcttatctg
gaacaacacggtgccgatccggctttattgctggaaaatagtgactgggaagaccgcaaa
gaagaattgctgatggatgcgatggatagtttggacgacagaagtcgcgacattctggct
agccgctggctggtggaagacaaagccactttgcacgaattggcggatcgttatcaagtc
tcggccgagcgcatcaggcagttggaacaaaatgccatgaaaaagctgaaagcagcggtg
agcttggcggcgtaa
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