KEGG   Methylomonas sp. LW13: U737_11805
Entry
U737_11805        CDS       T05879                                 
Name
(GenBank) helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
metl  Methylomonas sp. LW13
Brite
KEGG Orthology (KO) [BR:metl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:metl03400]
    U737_11805
Enzymes [BR:metl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     U737_11805
DNA repair and recombination proteins [BR:metl03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    U737_11805
SSDB
Motif
Pfam: UvrD-helicase AAA_19 Zn_ribbon_Top1 UvrD_C UvrD_C_2 AAA_30 Helicase_IV_N ADDB_N AAA_12 Zn_ribbon_recom AraR_C Viral_helicase1 Phage_endo_I
Other DBs
NCBI-ProteinID: QBC27528
LinkDB
Position
2602188..2605124
AA seq 978 aa
MQTPTPTPLPRYQLSRWAKWFAKDRRFHAFVLEPETLVLIDERQKQLKLQILNLQPGIGI
DPGWFWDTLLFTLNDGQTLRFGGVDKKQSALLLATIKRYVNQRIQRFYQQLVPALIQASQ
EARLLLSNKKYIRRSIAEQWIGNHLWLAAGLKRTDCLQRLPAELHQDYLAIRPLLDDAHQ
QVAKLNQTFIARQAQQFKDFFDQVETNPLTEAQRNACIIDEQHNLVLAGAGTGKTSTMIG
RAGYLINAGLAKPEQILMLAYARKAAQEMEERIQSKLGIQNLTVKTFHGLGLDIISQVEG
TRPAIDKMAEDDTLRAAFVDSHIQSLLEDERYRSRLLTYFLRFAYPYKSQFNFKSLGAYN
AYILENDIRTLQGELVKSYEECEIANFLYRQGIAYQYEANYQVNTSGPDYRVYQPDFFLP
AYGIYIEHFAVNEHNQTPPFIEQTNYLAGMAWKRELHQKYQTPLIETYSYLKQQGRLTEV
LSEKLQAAGVQFQPLPQNELLNQLNQLGQVSEFSKLMAQILSLFKAAYLSIKQLVEKADK
HEDQERMRAAAHLFEPIYQAYQQQLRDNATIDFDDMIGRAIEYVESGRFKSPYQYVLVDE
FQDISASRARLLKALMAQQPEASLFSVGDDWQSIYRFTGSDVALTKDFQTHFGDTATSVL
DQTFRFNNKIGEVASRFVIQNPSQIDKQIRSLRLVEQAAVSLIKTDQDLTGIQAALDDVA
GKANPSASVLLLARFNFKRPDVAALKRRYPQLSLQFMTVHASKGKEADYVVVFGLEKGEH
GFPSEKATHPLLELLLPQAEAFAHAEERRLFYVALTRARHHVYLVTNGLNPSPFVRELID
GDYAVTVDEFTGPGFQEQIADIPCPACKTGWMVPRDSQYGSFFGCNQYPLCNHTQRACQW
CGGGLKTQGRFLVCENRRCDFVEPICPHCQGAMVLRKGPHGQFWGCSHYRKNTAFSCSHT
EQFIDLQAAKVNCPVNAT
NT seq 2937 nt   +upstreamnt  +downstreamnt
atgcagacaccaacccccacgccgctaccacgttatcaactcagtcgttgggccaagtgg
tttgcaaaagatcgccgctttcacgcctttgttctcgagccagaaacgctggtgttaatc
gatgagcgccaaaagcaactcaagctccaaatcttgaaccttcagcctggaattggcatc
gaccccggttggttttgggatactttgttgtttacgttaaatgatggccaaacgctacgc
tttggcggcgtcgacaaaaagcagtcggcgttgttgctggccacgattaaacgctatgtt
aatcaacgcattcaaaggttttaccagcagttagtacctgcactgatacaagcatcccaa
gaagccagattgctgctttccaataaaaaatacattcgccgatccatagctgaacagtgg
ataggcaatcatttgtggttggcggcgggacttaaaagaacggattgtctgcagcgtttg
ccagccgagcttcatcaggattatctcgctattcggcctctattggacgacgcacaccag
caggttgccaaactcaatcaaacctttatcgctcgacaggctcagcaattcaaagacttc
tttgatcaggtcgaaaccaatccgctgaccgaagcgcaacgtaacgcttgcatcatcgac
gagcagcataacttggtgctggccggcgcgggtaccggcaagaccagcaccatgattggc
cgcgcgggttacctgatcaacgccggtctggcaaaacccgaacagattttgatgctggcg
tatgcccgcaaagcggcgcaagaaatggaagagcgcatccagtccaaactggggattcaa
aacctgacggttaaaacctttcatggcctgggtttagacatcattagccaggttgaaggt
accaggccggccatcgacaaaatggccgaagacgataccttgcgcgccgcgtttgtcgat
agccacattcaaagcttgctggaggatgaacgttatcgctcgcggctgctgacctatttt
ctgcgctttgcctacccctataaaagtcaattcaatttcaagagtttgggcgcctacaat
gcctacatccttgaaaacgatattcgtacgctacagggcgagctcgttaaaagctacgag
gaatgcgagattgccaatttcttgtatcgacaaggcattgcctaccaatacgaggccaat
tatcaggtcaacacctcaggcccggactaccgcgtctaccaaccggatttcttcctgccg
gcttacggcatttacatcgaacactttgcggttaacgaacacaatcaaacaccgcctttt
atcgagcaaaccaactatctggccggcatggcctggaaaagggagttacatcaaaaatat
caaaccccgttgatcgaaacctacagctacctgaaacaacaaggccgattgaccgaggta
ctcagcgaaaaattgcaggctgctggcgttcagttccaacccttaccgcaaaatgaacta
ctaaaccaactcaatcagctaggccaggtatcggaattcagcaaactgatggcgcaaatt
ctcagcttgttcaaagccgcttatctcagcatcaaacaactggtcgaaaaggcggacaag
catgaagaccaggaacgcatgcgtgctgccgcgcatttgttcgaaccgatctaccaagcc
taccaacaacagttgcgcgacaacgccaccatcgactttgacgatatgattggcagagcc
atcgagtacgtcgaatccggacgttttaagtctccgtaccaatacgtgttggtggacgag
tttcaggatatttcggccagccgggcgcgcttactgaaagcattgatggcccagcaaccg
gaagccagcctgttcagcgtgggcgatgattggcaatccatctaccgctttaccggcagc
gacgttgcactgaccaaagactttcaaacccacttcggcgatacggcgaccagcgtgctg
gatcaaacctttcgcttcaataacaaaattggcgaagtggcctcgcgcttcgtcatccaa
aaccccagccagatcgacaaacagatccgtagcctgcggcttgtcgagcaggctgccgta
tccctcatcaaaaccgatcaggatttaacgggcatacaggcggcactcgacgacgtcgcc
ggcaaggccaacccatctgccagcgtgttgctattagcgcgcttcaatttcaaacgaccc
gatgtcgccgccttaaagcgccgttatccgcaactgtcgctgcaattcatgacggtacat
gcctccaagggcaaagaagccgattacgtggtcgtgttcggtttggagaagggcgaacac
ggctttccgtcggaaaaagccactcaccccttgctagaactgttgttgcctcaagctgag
gcctttgcacacgccgaagagcgtcgcctgttctacgtggcactgacgcgggcgcggcat
cacgtgtatttggtcaccaacggccttaacccgtcgccattcgtcagagaactaatcgac
ggcgactacgccgttacggtcgacgaatttaccgggcccggttttcaagagcaaattgcc
gatattccctgtccagcatgcaaaaccggctggatggtaccgcgagatagccagtacggc
agctttttcggctgcaatcaatatccattgtgcaatcacacgcaacgggcttgtcaatgg
tgtggcggcggcttgaaaactcaaggccgctttctcgtttgtgaaaatcgccgttgcgac
ttcgtcgaaccgatctgcccacattgccaaggcgccatggtgctgcgcaaaggaccgcat
ggccaattttggggctgctcgcattaccgaaaaaacacagcgttttcctgttcgcacacc
gagcaatttatcgatttacaggccgccaaggtcaactgccccgtcaatgccacctaa

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