Methylomonas sp. LW13: U737_15035
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Entry
U737_15035 CDS
T05879
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
metl
Methylomonas sp. LW13
Pathway
metl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
metl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
U737_15035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metl03400
]
U737_15035
Enzymes [BR:
metl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
U737_15035
DNA repair and recombination proteins [BR:
metl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
U737_15035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
HHH_5
Viral_helicase1
AAA_11
Helicase_RecD
AAA_22
nSTAND3
RsgA_GTPase
HHH_2
NTPase_1
PIF1
HHH
AAA_16
AAA_28
T2SSE
MobB
cobW
AAA
MeaB
MMR_HSR1
TrwB_AAD_bind
AAA_29
PhoH
ATP_bind_1
SLFN-g3_helicase
ABC_tran
NACHT
AAA_18
NPHP3_N
AAA_5
AAA_7
SRP54
CbiA
AAA_24
TsaE
AAA_14
AAA_17
Motif
Other DBs
NCBI-ProteinID:
QBC28105
LinkDB
All DBs
Position
complement(3310155..3312347)
Genome browser
AA seq
730 aa
AA seq
DB search
MTLQAAPAHADNPVETLHGSIEHVTFHSEASGFCVLRVKVKGYRELITVIGSAASVTAGE
YIECLGCWVNDRQHGQQFKTISLKIVPPTTLDGIEKYLGSGMVKGIGPHFAKKLVKAFGE
QVFEVIEQTPERLLELPGIGKKRQERVTSAWAEQKVIREIMVFLQSHGVGTSRSVRIYKT
YGEQAIEKVRENPYRLALDIHGIGFKTADTLAQKLGIGPQSLLRAQAGVRHVLQEWSGEG
HCAAIRSNLCEMAAKLLEIPLPIIDQAIAAELTEGNLIAEIDGSDEFIFLTPLHRAELGC
AAHLNRLNQGDAPWGVIDADKAIPWVEEQTGMTLSQSQASAVRLVLQHKVSVITGGPGVG
KTTLVNSLLKILRAKRVRIGLCAPTGRAAKRLAESTGMEAKTVHRLLEFDPTQFAFKHND
ENPLDLDCLVIDESSMMDVVLMNQLLKAIPTEAAVLIVGDVDQLPSVGPGSVLADIIDSG
QIATVRLTEIFRQASTSKIITNAHRINHGQMPVVDKTEALNDFYCLYAETPEEIFAKLMQ
VVLERIPQRFQFHPVNDVQILTPMNRGGLGARSLNIELQARLNGHSEPKITRFGNTYAPG
DKVIQRINNYDKEVFNGDIGIKSIDLEESQVKIVFDDREVDYEFSDLDEITLAYATSVHK
SQGSEYPVVVIPLAMQHFMLLERNLLYTGVTRGKQLVVVIAQPKALAMAVKNQQSQRRIT
HLAVRLVKNP
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaccttacaggctgcaccagcgcatgcggacaatcccgtcgaaacactacacggctcc
atcgagcatgtgacgttccatagcgaggcttcgggattttgcgtgttgcgagtcaaggtc
aaaggttatcgtgaactgattacggtgatcggctcggccgccagtgtcacggcgggtgaa
tacatcgaatgcctgggttgctgggtgaatgatcgccagcacggccagcaattcaaaacc
atctcgttaaaaatcgtgccgccgaccacgttggacggcatcgaaaaatacctgggctcc
ggtatggtcaaaggtatcggtccccatttcgccaaaaaactggtcaaagccttcggtgag
caagtgttcgaagtgatcgagcaaacacccgagcgtctgttggaattaccgggaattggt
aagaaacgccaggagcgggtgaccagtgcctgggcggaacagaaagtgattcgggagatc
atggtttttctgcaatcgcatggcgtcggcacatcgcgttcggtgcgaatttataaaacc
tacggcgagcaggctatcgagaaagtgcgcgaaaacccctatcgcctagcactggatatt
cacggcatcggctttaaaacggctgacacgctggcacagaagctcggcatcggcccgcaa
tcgctgctacgcgcccaagcgggtgtccggcatgtcttgcaggaatggtccggcgaaggt
cactgcgcggcgattcgcagcaatctgtgcgaaatggcggcgaaactactggaaattcca
ctgccgattatcgaccaagcgatcgcggcggaattaaccgaaggcaatttaatcgccgaa
atcgacggcagtgacgaattcatttttctgacgcctttacatcgcgctgaactaggctgt
gccgcccacctgaaccgattaaatcaaggtgatgcaccctggggtgtaattgacgccgat
aaagccataccctgggtggaagagcaaaccggcatgaccttgtcgcagtcgcaagcgtct
gccgttcgactggtactccagcataaagtctcggtgatcacgggtggtcccggtgtcggt
aaaaccacgctggtcaacagtctactcaagattctcagagccaaacgggtgcgaatcggt
ttgtgtgcgccgacggggcgagcggcaaaacgcttagcggaatcgaccggcatggaagcg
aaaacggtacatcgcttactggagttcgatccgacgcagttcgcgttcaagcataacgac
gaaaacccgctcgacctcgattgcttggtgatcgatgagtcgtcgatgatggacgtggtg
ttgatgaatcagctgttaaaagccataccgacggaagctgcggtcttgatcgtcggagat
gtcgatcaattaccctcggtcggtccgggctccgtattggccgacatcatcgattccggt
caaattgccaccgtgcgtctgaccgagattttccgccaggccagtacctccaaaatcatc
accaacgcccatcgcattaaccacggacaaatgcccgtggtggataagaccgaagccctc
aatgatttctattgcctctacgccgaaacacccgaggaaattttcgctaaattgatgcaa
gtcgtcctcgaacggattccgcagcgtttccaatttcatccggtcaacgacgtacaaatt
ctgacgcccatgaatcgcggtggcctgggcgcgcggtcgctgaacatcgaattgcaagct
cggttaaatggacacagcgaaccgaagattacgcgctttggtaatacctatgcgcccggt
gataaggtcattcagcgaatcaacaactacgacaaggaagtgtttaacggtgacatcggg
atcaaatccattgatcttgaagaaagccaagtcaagatcgtattcgatgatcgggaagtt
gactacgaattcagtgatctggatgaaattaccttggcttacgcgaccagcgtgcacaaa
tcgcaaggctcggaatatccggtggttgtcattccattggccatgcagcactttatgctg
ctggaacgcaatctgctgtataccggcgtcacgcgtggcaaacaactggtcgtggtgatt
gcccagcccaaggcgttggccatggctgtgaaaaaccagcaatcgcagcgaaggatcact
catctggctgtcaggttggttaaaaacccgtga
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