Methylomonas sp. LW13: U737_15050
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Entry
U737_15050 CDS
T05879
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
metl
Methylomonas sp. LW13
Brite
KEGG Orthology (KO) [BR:
metl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
metl03032
]
U737_15050
03036 Chromosome and associated proteins [BR:
metl03036
]
U737_15050
03400 DNA repair and recombination proteins [BR:
metl03400
]
U737_15050
DNA replication proteins [BR:
metl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
U737_15050
Chromosome and associated proteins [BR:
metl03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
U737_15050
DNA repair and recombination proteins [BR:
metl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
U737_15050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
TetR_C_30
Motif
Other DBs
NCBI-ProteinID:
QBC28108
LinkDB
All DBs
Position
3313655..3313963
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AA seq
102 aa
AA seq
DB search
MTKSQLIEHISLKLPHLQQCDVEMAINITIDVMTHHLAHGQRIEIRGFGGFSVIQRAARM
GRNPKTGEQVSLPIRHATHFKPGLDLRERVSHSRDRFPLIKD
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atgactaaatcccagctcatcgaacacatcagtcttaaattgccccatttacagcaatgc
gatgtcgaaatggcgatcaacatcaccatcgatgtgatgacccatcatttggcacatggc
caacgtattgaaattcgtggtttcggtgggttctcggtgattcaacgagccgcccggatg
ggtcgcaatcccaagacaggcgaacaagtgagtttgccgatacggcacgccactcacttc
aaaccagggctggatttacgtgaacgagtgtcccattccagagaccgattccccttgatc
aaggactag
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