Methylomonas sp. LW13: U737_15535
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Entry
U737_15535 CDS
T05879
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
metl
Methylomonas sp. LW13
Pathway
metl03030
DNA replication
metl03430
Mismatch repair
metl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
metl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
U737_15535
03430 Mismatch repair
U737_15535
03440 Homologous recombination
U737_15535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
metl03032
]
U737_15535
03400 DNA repair and recombination proteins [BR:
metl03400
]
U737_15535
Enzymes [BR:
metl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
U737_15535
DNA replication proteins [BR:
metl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
U737_15535
DNA repair and recombination proteins [BR:
metl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
U737_15535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Bac_A_amyl_C
Motif
Other DBs
NCBI-ProteinID:
QBC28192
LinkDB
All DBs
Position
complement(3409028..3412516)
Genome browser
AA seq
1162 aa
AA seq
DB search
MTPSFVHLRIHTEFSLVDGIVRIKPLVKKLAEYQMPAAAITEQSNLFSLVKFYKAAQGAG
IKPLIGADALIFNPDEPASPFRLTMLARNQKGYVTLTELISRGYQEGQHQGIPMLQKDWI
AENHEGLIVLSGAMDGDVGQALLAENTEQAKRCAEYWRDLFEDSFYLELQRLGKADEERY
IKLAADLAAELDLPVVATNDVRFISKNDFDAHEVRVCIHQGRVLDDSRRPKNYTAQQYLR
TAEEMAELFADIPEALANSVEIAKRCNVELTLGENYLPDFPVPEGMTLDDYFKHASRQGL
EERLIQYPPVGKGSFAENRKVYDERLEVELNVITQMGFPGYFMIVADFIQWAKNNAIPVG
PGRGSGAGSLVAYALKITDLDPIEFDLLFERFLNPERVSMPDFDIDFCMERRDEVIDYVA
RHYGRDHVSQIITYGSMAAKAVIRDVGRVMGHAYGFVDRLAKLIPFEIGMTLDKALQDSA
ELKALYDTEEEVKALIDMARSLEGISRNAGKHAGGVVISPTKLTDFSPLYCEQGGGNLVT
QFDKDDVEAVGLVKFDFLGLRTLTIIDWALQTINRQRAQRGEEPVDISQIPRDDLPSYEL
LKNAQTTAVFQLESRGMKELIKKLKPDCFDDIIALVALFRPGPLESGMVDDYINVKHGAK
AEYAHPLLEPILKPTNGVILYQEQVMQIARELASYTLGGADMLRRAMGKKKPEEMAKERE
KFMSGALANQIDAAIATYVFDLMEKFAGYGFNKSHSAAYALVAYQTAWLKAHYPAAFMAA
VMSSDMDNTDKVVVLIDECREMKLEICPPDINVSDFRFTVNDQGQIVYGIGAIKGVGENA
IEDLLKERAANGAFAGLYDLCKRVDLRKVNRRVLEALIRAGALDTIDPNRAAHLAELTTA
LRVAEQHGKMALAGQNDLFGLAVQVEVSDGEAEAYSTVVEPWTEKEKLEAEKQTLGLFLT
GHPIAEYLPELKHITHGSLASLEVDAGRSRGKMEARVAGLIVEMRTRQTKQGKMMGFATL
DDRTGRLEVAAFSNIYEKYRNLLSKDTILIAEGSLAMDDFTNSLRMTAEKLYSMEEAREL
YARGITLTIDLANGGLPSGWLASLQATLTPFCGGQCPIQIEYRTGTDKATLQLGDDWRVR
PSDELLIRLRRLLSNETVLVRY
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgagtttcgttcatcttcgtattcatactgagttctccctggttgacggtata
gtcagaatcaagccgttggtgaagaaactggctgagtatcaaatgccggccgccgcgatt
accgaacaaagcaatttgttctcgctggttaaattctataaagccgcacaaggcgccggc
atcaaaccattgatcggcgccgatgcgctgattttcaatcctgacgagccggcctcgccg
tttcgcctgactatgttggcgcgcaatcaaaaaggctatgtgacgttgaccgagctgatt
tcccgaggctaccaggaagggcagcaccaagggataccgatgctgcaaaaagactggatt
gccgagaatcatgagggtttgatcgtgttatcgggagcgatggatggtgacgtcggtcag
gctttgttggcggaaaataccgagcaagccaaacgctgtgccgaatattggcgggatttg
ttcgaagacagtttttatctggaattgcagcggctcggcaaagcggacgaagagcgttat
attaaattagcggcggatttggctgccgaactggatttgccggtcgtcgccaccaacgac
gtgcgttttatcagtaaaaacgatttcgatgcgcatgaagtgagggtctgtatccatcag
ggccgggtgctggacgacagccgccggccgaaaaattacacagctcagcaatacctgcgt
actgccgaggaaatggccgaattgtttgccgatattccggaggcattggccaatagcgtg
gaaattgctaaacgctgtaatgtcgagctgactctgggcgaaaattatttgcccgatttt
ccagtccccgaaggtatgacgctggacgactatttcaagcacgcctcgcgtcaagggctt
gaagagcgtttaatccagtatccgccggtaggcaagggcagcttcgcggaaaaccgcaaa
gtctatgacgaaagattggaagttgagctgaacgtgatcacccaaatgggttttcccggt
tatttcatgattgttgccgactttattcagtgggccaagaacaatgcgataccggtcggg
ccggggcgaggatcgggtgccggttctttggtggcgtatgcgttgaagattaccgacctt
gatccgatcgaattcgatttgctgttcgaacggtttttgaatcctgagcgggtgtcgatg
ccggatttcgatatcgacttctgcatggaacgccgcgacgaggtgatcgattacgtggcc
cgccactatggccgcgaccacgtatcacagattatcacctacggctcgatggcggctaag
gcggtaattcgcgacgtagggcgggtaatggggcacgcctacggttttgtggatcgcttg
gccaagctgattccattcgaaattggcatgaccctggataaggctctgcaagacagtgcc
gaattaaaggcgttgtacgataccgaggaagaggttaaagcgctgatcgatatggcgcgt
tcgctggaaggcatctcccggaatgcgggtaagcacgccggtggcgtggtgatttcgcct
accaaactcaccgatttcagccctttgtattgcgagcagggcggcggcaatctggtcacg
cagtttgataaggacgatgtcgaagcggttggcttggttaaattcgacttcctggggttg
cggaccttgacaatcatcgattgggcgctgcaaaccatcaatcgccagcgcgcgcagcgc
ggtgaagagccggtcgatatttcccagattccgcgcgacgacctgcccagctatgaatta
ttaaaaaacgcccagactacggccgtgtttcagctggagtcgcgcggcatgaaggagttg
atcaaaaaactgaaaccggattgcttcgacgacattatcgcgctcgtcgctttattccgt
cccggccctttggaatcgggcatggttgacgattacatcaacgtcaagcacggcgccaag
gctgaatacgcgcatccattactggaaccgattttaaaacccaccaacggcgttattctg
tatcaggaacaggtgatgcagattgcccgggaattggccagttacactttgggcggcgcc
gatatgttgcggcgggcgatgggtaagaaaaagccggaggaaatggccaaggagcgggaa
aaatttatgtcgggcgcgttagcgaaccagatcgatgccgcgatcgcgacttatgttttc
gacctgatggagaagtttgccggctacggtttcaacaaatcgcattcggcggcttacgct
ttggttgcgtatcagaccgcctggttgaaggcgcattatccggccgcgttcatggcggcg
gtgatgtcgtcggatatggataacaccgacaaagtggtggttttgatcgacgaatgtcgg
gagatgaagctggagatttgcccgccggacattaatgtttccgactttcgttttacggta
aacgaccagggtcagattgtttatggtatcggcgcgattaagggtgtcggcgaaaatgcg
attgaagatctattaaaagaacgggctgccaacggcgcgtttgcgggtttgtacgatctg
tgcaagcgcgtcgatttgcgcaaggtcaatcgccgggttttggaagcattgatcagagcc
ggagcgctggataccatcgatcctaatcgcgcggcgcatctcgctgaattgactactgcg
ttgcgagtggccgaacaacacggaaaaatggcgttggccggtcaaaacgatctattcggt
ttggcggtacaagtggaagtcagcgacggtgaagcggaagcttattccaccgtggtcgag
ccgtggaccgaaaaagaaaagctggaagcggaaaagcaaactttggggctatttctgacc
ggccatcccatcgccgaatatttgccggaattaaaacatatcacccatggctcgctcgcc
agtctggaagtcgatgccggccgctccagaggcaaaatggaagcgcgtgttgccggcctg
atcgtggaaatgcgtacccggcaaaccaagcagggcaagatgatgggctttgcaacgctg
gacgaccgtaccggccggctggaagtggcggccttcagcaatatatacgaaaaataccgc
aacctgctcagcaaagacacgattctgattgccgaaggttcattggcaatggacgacttt
accaacagtcttaggatgactgccgagaagctctacagtatggaagaagcgcgcgagtta
tatgcccgcggcattacgttgacgatagatctggccaatggcggcctgccgtccggttgg
ctggcaagcctacaggccacgctgacgccattctgcggcggtcaatgtccaatccaaatc
gagtaccgaactggcaccgataaagcgaccctgcaattgggcgacgactggcgcgtgcgc
cctagcgatgaactcctgatccgcctgcggcgcttgttatccaacgaaacggtgttggtc
aggtattga
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