Methylomonas sp. LW13: U737_17740
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Entry
U737_17740 CDS
T05879
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
metl
Methylomonas sp. LW13
Brite
KEGG Orthology (KO) [BR:
metl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
metl03021
]
U737_17740 (rapA)
Transcription machinery [BR:
metl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
U737_17740 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QBC28604
LinkDB
All DBs
Position
complement(3915430..3918192)
Genome browser
AA seq
920 aa
AA seq
DB search
MNEFIPGQRWISNTESELGLGMVMDAEFNRVTVLFLATGDRRVYARDNAPLTRVQFNEGD
VIESADFAKISVQQVQQHNGLLTYIGVDEDGQLQQIDEMELNHHIQFNKPQDRLFTGQFD
PTVWFLLRYETWRRQQQHQQAATKGLQGARASLIPHQLYIAHQAASRALPRIMLADEVGL
GKTIEAGLIIQHRLINGLSKRVLILVPESLLHQWLVEMLRRFNLRFSIFDESRCFACPDE
NPFLSEQLVLCSQRFFADSPHRQQQALDAGWDLVVVDEAHHLEWSEDAPSADYLFVEQLA
LASPGLILLTATPEQLGKESHFARLRLLDPDRFYRFEQFLREESQFEPVARLANLLISGA
ALDAEQQEQLKNLLRQDNVDKLLQQVNDSQAIAREELIKLLLDHHGTGRILFRNSRQTVQ
GFPDRQRHAYPLQGEDTADLANSPYLHWLVEQLKALGDEKALLICKRAETAIQLEQLLRQ
HVGHTAAVFHEGMSIVERDRAAAFFADEESRAQVLICSEIGSEGRNFQFVRHLFLFDLPE
NPDLLQQRIGRLDRIGQKHVIQIHIPYLLDSAQHVLFRWYDEGLDAFRHNCSGAAQVLKL
LGDARDSALLSRDAATVEALIANTKALNSQVEEELHKGRDLLLELNSCRPQEAARLVEEI
SAGERDGSLWPFMEAMFDCYGVDVEDHSRDCHILWPSENLRIAHFPMLQDDGLTVTINRD
IALAREDMQFLTAEHPMVLSAMDLVLSSETGNAAVSVVKHPQLKAGQFLLELLFVAECSA
PAELQIGRFLPHTPLRVLVDQNKKDLTAVISHDSLVETGDSFDKAQISQFLNSQRQHIQD
MIKVAEQLAGAQMQKLIAESSNLMIATLTGEIKRLVRLKKINPGIKEQEIEQLKEMTMLS
HESIQETQLRLDAVRFVITS
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagtttattcccggccaacgctggattagtaataccgaatccgaattgggttta
ggtatggtgatggatgctgaatttaaccgcgtcaccgtgctgtttttagcgaccggcgac
cggcgggtttacgccagagataacgcgcctttgacccgggtgcagttcaacgaaggcgat
gtgatcgaatcggcggatttcgcgaagattagcgtgcaacaggtgcagcagcacaacggt
ttgttgacctacataggtgttgatgaagacggtcagttgcagcaaatcgatgagatggag
cttaaccatcatattcaatttaacaaaccgcaagatcgtttatttaccggtcaattcgac
ccgacagtctggtttttactgcgctacgaaacctggcgacgtcagcaacagcatcagcaa
gcggctaccaaaggtctacagggcgcgcgagcgtcactgattccgcatcagctctatatt
gcccatcaagccgccagccgcgccttgccgcgcatcatgctggccgatgaagtggggctg
gggaaaaccatagaagcaggtttgatcattcaacatcgcttgatcaacggtttaagcaag
cgggtgttgattttggtgccggaaagcctgctgcatcaatggttggtggagatgctgcgc
cgcttcaatctgcgtttcagcattttcgacgagagccgctgctttgcctgtcccgacgag
aacccgtttctcagcgagcaattggtgctgtgcagccagcgtttttttgccgattccccg
catcgccagcaacaagccttggatgccggctgggatttggtggtggtcgacgaagcccat
catctggaatggagcgaagatgcacctagcgccgactatctattcgtcgagcaattagcc
ttggcgtctcccggtctgattctgttgaccgcgacccctgagcaattaggtaaggaaagc
cattttgcgcgtttgcgcttgctcgatcccgaccgtttctatcggtttgagcagttcttg
cgcgaagaaagccagtttgaaccggtagccagactggccaatttactgatttccggcgca
gcgctggatgccgaacagcaggagcaattgaaaaacttattaagacaggacaatgtcgac
aaactgctgcaacaggttaacgacagccaagccattgctcgggaagaattgatcaaattg
ctgttagatcatcatggtaccggtcggattttattcagaaactctcggcaaaccgtgcag
ggctttccggatcggcaacgccatgcttatccgctgcaaggtgaagacacggcggatttg
gctaacagcccgtatctgcattggttggttgagcagttgaaagccttgggtgacgaaaaa
gccctgttaatctgcaaacgcgcggaaacggcaatccaactggagcaattgttgcggcag
cacgttggccataccgcagcggtgtttcatgaaggcatgagtatcgtcgagcgggatcgg
gctgcggcgttttttgcagacgaagagagccgggcgcaagtattgatttgttcggagatc
ggtagcgaaggccgcaattttcaattcgtgcgccatctgtttttgttcgatctgccggaa
aatccggatttgttgcaacaacgcatcggtcgtctggataggataggccagaagcatgtc
attcaaattcatatcccttatttgctcgatagtgcccagcacgtgttattccgctggtac
gacgagggcctggacgcattccggcataattgttcaggtgccgcgcaagtcttgaagttg
ctcggcgatgctcgtgacagcgcgttgctcagccgcgatgcggcgacagtagaagcattg
atcgccaataccaaggctttgaacagtcaggttgaagaggaattgcataaaggccgcgat
ttgctgttggagctaaattcttgccggccgcaagaagccgcgcgcctcgtggaagagatc
agtgccggcgaacgcgacggtagtttgtggccgtttatggaagcgatgttcgactgttat
ggcgtcgatgttgaagaccattcgcgcgattgtcatatcctctggcccagcgaaaatctg
cgcatcgcccattttccgatgctgcaagacgacggcctgacggtaacgatcaaccgagac
atcgcgctggccagggaagacatgcagtttttgaccgccgagcatcccatggtattgtcg
gccatggatttggtgttatccagcgagaccggcaatgccgcggtcagcgtggtcaaacat
ccgcaactcaaagccggccaattcctgttggagttgttgtttgttgccgaatgcagtgcg
cccgccgaattgcaaatcggccgatttttaccgcacacgccgctgcgcgttttggtcgat
caaaataaaaaggatctaacggctgttattagccacgacagcttagtggagaccggcgat
agcttcgataaggcgcaaatcagccagtttttgaacagccaacgtcagcatattcaggat
atgatcaaagtcgcggagcagttggcgggtgcgcaaatgcagaagttgatagcggaaagc
agtaatctgatgatagccacgctaaccggggaaatcaaacgactggtgcggctgaaaaag
atcaatcccggcatcaaggagcaggaaatagagcaactcaaggagatgaccatgctctcg
cacgaaagtatacaggaaactcagttgcggctggatgcggtgcggtttgtgattaccagc
taa
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