Methylomonas sp. LW13: U737_21005
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Entry
U737_21005 CDS
T05879
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
metl
Methylomonas sp. LW13
Brite
KEGG Orthology (KO) [BR:
metl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
metl03009
]
U737_21005 (rimO)
Enzymes [BR:
metl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
U737_21005 (rimO)
Ribosome biogenesis [BR:
metl03009
]
Prokaryotic type
ribosomal protein modification factors
U737_21005 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
QBC29189
LinkDB
All DBs
Position
complement(4582962..4584272)
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AA seq
436 aa
AA seq
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MSNPRVGFISLGCPKALVDSEQILTKLRSEGYQVSPNYKDSDLVIVNTCGFIDAAVEESL
DSIGEALAENGKVIVTGCLGARQDEILARHPQVLKITGAHATDEVVSAVHEHLPPAHNPF
TDLVPPQGIKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIDDVMREAERLADAG
VKELLIVSQDTSAYGLDLKYQSRRWRGREMQTRFYDLAEALGELGIWARMHYVYPYPHVD
DVVPLMAEGKILPYLDIPFQHANSRILKLMKRPAAAENNLERIKAWRKICPDLTIRSTFI
VGFPGETEQDFDELLQFLSEAQMDRVGCFAYSPVKGAVANDLPDAVPEALKQERLARFME
HQAAISAERLQRRVGRIETVLVDEVVEEGAVARSKSDAPEIDGQVFIDGASHLQVGDFVD
VEIEEADEYDLWGKLI
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacccccgtgttggatttatcagtttaggttgcccaaaagccctggtcgatagc
gagcaaattttgaccaagctgcgtagcgagggctatcaggtgtcgccgaattacaaagat
tccgatctggtgatcgtcaatacctgcggctttatcgatgcggcggtcgaagaatcgctg
gacagtatcggcgaggctttggcggaaaacggcaaggtcatcgtcaccgggtgtttggga
gcgcggcaagacgagattttggctcggcatccgcaggttttaaaaatcaccggcgcgcac
gccactgatgaagtggtgtctgcggtgcacgagcatctgccgcctgcgcataatccgttt
accgacttagtgccgccgcaaggcatcaagctgacgcctaaacattacgcttatctaaaa
atctccgaaggctgcaatcatcgctgcacgttttgcatcattccgtcgatgcgcggcgat
ttggtgagccgtcccattgacgatgtgatgcgggaagccgaacggctggccgatgccggc
gttaaggagctgctaatcgtttcgcaagataccagtgcttatggtttggatttgaaatat
caaagccggcgttggcgcggccgggaaatgcaaacccggttttacgatttggccgaagcc
ttgggtgagttgggtatctgggcacggatgcattatgtctacccgtatccgcatgttgat
gacgtcgtgccgctgatggctgaaggcaagattctgccgtatttggatattccgtttcag
cacgccaacagccgaattttaaaactgatgaaacgtccggctgcggcggaaaataatctg
gaacgcatcaaagcttggcggaagatttgtccggatttgactattcgcagcacgtttatc
gtcggttttcccggcgaaaccgagcaagactttgacgagttgctgcaattcttaagcgaa
gcgcaaatggatagggtgggctgttttgcttattcgccggtgaagggggcggtggctaac
gatttgcccgatgcggtgccggaagcgcttaaacaggaacgcttggcgcgttttatggaa
catcaagcggctatcagcgcagagcgcttacaacgccgagttggccgaatcgaaacggtg
ttggtcgatgaggtggtcgaggagggtgcggtggcgcgcagcaaaagcgatgcacccgaa
attgacggccaggtgtttatcgatggcgcaagtcatttacaagtcggcgatttcgtcgat
gtcgaaatcgaggaagccgacgagtatgacttgtggggtaaactgatctaa
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