Methylomonas sp. LW13: U737_22215
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Entry
U737_22215 CDS
T05879
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
metl
Methylomonas sp. LW13
Brite
KEGG Orthology (KO) [BR:
metl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
metl03016
]
U737_22215 (thpR)
Enzymes [BR:
metl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
U737_22215 (thpR)
Transfer RNA biogenesis [BR:
metl03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
U737_22215 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
UCH
Motif
Other DBs
NCBI-ProteinID:
QBC29411
LinkDB
All DBs
Position
4840009..4840515
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AA seq
168 aa
AA seq
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MKRLFFALWPEQNARQQCAALISQLNRTGKPVKEANLHVTVLFLGRISAEQQAIITREAG
KLPTPLITLNFDHLSFWKKPAVLCLTASQFDQSVSTLNENLARIAKQQGIPIENRLFKPH
VTLVKKASSAIDFDFAPILWQSIGFCLVESCSGPDGVEYRIIQRWPAI
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacgtctcttttttgccttatggccggaacaaaacgccaggcaacaatgcgcggct
ttaatcagccaactaaaccgaaccggaaaacccgttaaggaagcaaacttacatgtcacc
gtgttgtttttagggagaatttctgcagaacaacaggccataatcaccagggaggcagga
aaactgccaacaccgctgataacgttaaattttgaccacctgagtttctggaaaaaacct
gccgtgctatgcctgaccgccagccaattcgatcaaagcgtgtcgacattaaacgaaaac
ttggcccgcatagccaaacaacaagggatacccatcgaaaacagactattcaagccgcat
gtcactttagttaaaaaggctagttcggcaatcgatttcgatttcgcccccatactttgg
caatcaataggattctgcttggtagaatcctgctcaggtccggatggcgttgaatatcga
attatccaacgctggccggcaatttag
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