Methylomonas sp. LW13: U737_22405
Help
Entry
U737_22405 CDS
T05879
Name
(GenBank) RHS repeat protein
Organism
metl
Methylomonas sp. LW13
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
WHH
PG_binding_1
TEN_YD-shell
Colicin-DNase
OCRE
NnrU
Motif
Other DBs
NCBI-ProteinID:
QBC29446
LinkDB
All DBs
Position
complement(4867214..4871629)
Genome browser
AA seq
1471 aa
AA seq
DB search
MAGWKDPRPTGSEIRPRNIDAGTTIRDATPRPTPIGVLPGQPAKAAPRIVPTRSGLPTLK
PGSQGAEVRQLQGLLNACLSPSPNLVLDGRFAQATANAVRQYQQSVGINADGIVGKDTWF
YLLKGDKAKVVAPMPPPPPATASSSAVQSAPAPNMPIPVETVGSWTLERKFSEALRLTAP
KLPGSMRREFEALLSPESLAIMAATLVIWAGAHVFGVGEIVDILMLVGGILMFGLAVFGV
ARDLGEFLAITATAGSEQDLDEAATHLAEAIAVIGVAAFVALLAKVRSLRGKKGLARESG
AASEAVTPSQATGKSASGKAPARVGAAAEGEAAGGASTSKQTACPGKDCKTAGEPISMLT
GEEMLEKIDFTWDGPLPLAWRRYYRSSQSDVDHQLGYGWLTPLDEWLEIGERVTFCNADG
QRIDLPLPKPGAHSINLPEQVRLYRENGQYRIVDPTGLAKTFTGRSGRCPLRAWHNSQGQ
SLYFHRDANGDVERISASWNKHLLLDRQGRRIVAIRPGKRVGSGFEAAGEPLVNYLYSEE
GDLIGARDRLEQGESYAYRNHVIARRTLPSGFNFYFEWDQDTPQGKCLHNWGDNGVYDYR
FEWLPDGVSHAIDSRGGVAVYHHDPQGLLLLERSPEGRETRHSYNADNQLAQTVAPDGGV
TRFNYDSEGRLIGVSDALGFSQRVKYDKQGRPVELIDALDQRWLRRYDANGRLEETVAAN
GAVTQYQYNAQGVPVRITDALGRTRSLLWDEQLRLVGEIGFEGIKTRYQYDDDDRIVAIV
DQDKRTTRYGYDVAGRVIAVQHADGNTVQLRYNAAGLLTHYIDGLGHTTEYRYDDGLSQP
TARIDPLGHEMRYRYDSERNLIGLINPKGETYSLNYDRDENLIEEIGFDGRIQRYRYNAA
GVLEAYLQPAADGDWSVTRFERDRLGRLLKKHAADGSLSQYGYDPLGRLQLAKNADSLVL
LGYNALGQINQENQNGAIVRHKYDLLGRRIHTETPDRHRIDYRFGERYLDSIEFDGQTLT
SHRYDDLGREIGRSQGPLNTDYDYDPLGRLLRQRVAGKGQAPLIGRQYSYDTAGKLRELD
DLRQGRSQYNYDPAARLIRSEGLSPESFVHDPAGNLLGASAETGRVEGDRLLMMGDRHYN
YDAAGNLTEEKRGKAGHIVTCYQYDSDNRLVRAETPQGISEYRYDALGRRIAKHTAQGET
RFQYDGPRLLAETDSLRSRTYLFEPGSFRPLALHEQHNTQAGGSTYHYHLDHLGTPRELT
DTDGRIVWSARYRAYGNLALADVEAIDNPLRFQGQYYDQETGLHYNLNRYYDPNAGRFIH
QDPIGIKGGINIYCYLVNPIMSVDPLGLAPLTGVDFSGSPDLFPSGTGQQSIVEITMQGS
RSRDFVQAYKAAGISPVDAEGYTWHHVDDFNPSTGKTTMQLVKTEAHEASFPHRGSVSQF
EKQYGVEYDSKESVDIANKNGWLKGRKPKCG
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atggccggatggaaagatcccaggccaacgggctccgagatccggccgcgcaacatcgac
gccggcacaacgatccgcgatgctacgccacggccgacgcccataggcgtattacccggc
caaccggccaaggccgcgccgcgcatagtaccgactcgtagcggtttaccgacattaaag
ccgggctcgcaaggtgctgaggttcggcagttgcaaggcttacttaacgcctgtcttagt
ccatcgccaaacttggtccttgatgggcggtttgctcaggctaccgcgaatgccgtgcgc
cagtatcaacaaagcgtcggtattaacgctgacggtatcgtcggtaaagacacctggttt
tatctgctgaagggggataaagcgaaagtcgtagcgccgatgcctccaccgccacccgca
actgccagtagtagcgcggtccaatcggctcccgcacctaatatgccgataccggtggaa
acggtggggagctggacgctggagcgcaaattctccgaagccttgcgtttaaccgcaccc
aaactgcccggcagtatgcgccgcgagtttgaagcgctgctcagtccggaaagcttggcg
atcatggccgcaacattggttatttgggcgggcgcccacgtgtttggcgttggcgaaatc
gtcgatattctgatgctggtcggcggcatcctgatgttcgggctcgcggtattcggcgtc
gcccgcgacctgggcgaatttttggcgatcaccgccactgccggaagcgaacaagatcta
gacgaagctgccacgcatctggcggaagccatcgcggtgatcggtgttgcggcctttgtc
gcgctgttggcaaaagtgcgttctttacgcggaaaaaaaggcttggcccgcgaatcggga
gccgcctcggaagcagtaacgccatcgcaagcaaccggcaaatcggcatccggtaaagcg
ccggctcgcgtgggtgcggcggcggagggggaagccgccggcggggcctccacctctaaa
caaaccgcatgtccgggtaaggattgcaaaaccgccggcgagccgatcagcatgctcacc
ggcgaggaaatgctggaaaaaatcgactttacttgggatggcccattgcccttggcttgg
cggcgttattaccgtagcagccaatccgatgtcgatcatcaattgggctacggctggctg
acgccgttggacgagtggctggaaatcggcgagcgcgtgacgttttgcaatgccgatggt
cagcgtatcgatttgcccttgcccaagcccggagcccatagcattaatctgccggaacag
gttcgcttgtaccgggaaaacggccagtatcgcatcgtcgatcctaccggtttggcgaaa
accttcaccggtcggtctggccgttgccctctacgggcctggcacaacagccagggccaa
agcctgtattttcaccgcgacgccaacggcgacgtcgagcgcatctccgccagctggaac
aagcatttactgttggaccgccaaggccggcgcatcgtcgcgattcgtcccggcaaacgt
gtcggaagcggattcgaagcggccggcgagccgctggtaaattatctttatagcgaagaa
ggcgatttaatcggtgctcgcgaccggcttgagcaaggcgaaagctatgcttatcgcaac
catgtcatcgcccgccgcaccctgcccagcggctttaacttttacttcgaatgggatcaa
gacacgccgcaaggcaaatgcctgcacaactggggtgataacggtgtttacgactaccgc
ttcgaatggttgccggacggcgtcagccatgccatcgattcgcgcggcggcgtcgcggtg
tatcatcacgatccgcaaggtttgttgctcctggagcgcagcccggaaggccgggaaacc
cgccacagctacaacgccgacaatcaactggcgcaaaccgtagcaccggatggcggcgtc
acccgctttaactacgatagcgaaggccgcctgatcggcgtctccgatgcgctgggtttt
agtcagcgcgtcaagtacgacaaacaaggccgtccggtcgaactgatcgatgccctggat
cagcgctggctgcgccgctacgacgccaacggtcgtctggaagaaaccgtcgccgccaac
ggcgcggtcacccagtatcaatacaacgcccaaggcgtgccggtgcgtatcaccgatgca
ctgggccgcacccgctcgctgttgtgggacgaacagttgcgcctggtcggcgagatcggc
tttgagggcatcaagacccgctaccaatacgacgatgatgatcgtatcgtcgccatcgtc
gatcaagacaaacgcaccacccgttacggctacgacgtggccggccgcgttatcgcagtg
caacacgcggacggcaacaccgtgcaactgcgctacaacgccgccggtttattgacccat
tacatcgatggcctgggccacaccaccgaataccgctacgacgacggcctgtcccaaccc
accgcccgcatcgatccgctgggccacgaaatgcgttatcgctacgacagcgaacgcaac
ctgatcggcctgatcaaccccaaaggcgaaacctacagtcttaactacgaccgcgacgaa
aacctcatcgaagaaatcggcttcgacggccgcatccaacgctaccgctacaatgccgcc
ggcgtgctggaagcctacctgcaacccgccgccgacggcgattggagtgtcacccgcttc
gaacgcgaccgtctcggccgcttgctgaaaaaacacgccgccgacggcagcctgagccaa
tacggctacgatccgttgggccgcttgcaactagccaaaaatgccgacagcttggtgctg
ctcggctacaacgccctgggccagatcaaccaggaaaaccagaacggcgccatcgtccgc
cacaaatacgacctgctgggccggcgcatccacaccgaaaccccggaccggcaccgcatc
gactaccgtttcggcgagcgctacctggacagcatcgaattcgacggccaaacccttacc
agccaccgctacgacgatctgggccgggaaatcggccgcagccaaggcccactcaacacc
gactacgactacgatccgctgggccgcctgttgcggcaacgtgtcgccggcaaaggccag
gcgccgctgatcggtcgccagtacagctacgatacggccggaaaactccgcgaactggac
gacctgcgccagggccgcagccaatacaactacgaccccgccgcccgcctgatccgtagc
gaaggccttagcccggaaagcttcgtccacgatccggccggcaacctgctgggcgccagc
gccgaaaccggccgcgtcgaaggcgaccgcttgctgatgatgggcgaccgccactacaac
tacgacgccgccggcaacctgaccgaagaaaagcgcggcaaggccggccacatcgtcacc
tgctaccagtacgatagcgacaaccgcctggtccgcgccgaaacgccgcaaggaatcagc
gaataccgctacgacgccctgggccggcgcatcgccaaacacaccgcgcaaggcgaaacc
cgttttcaatacgatggcccgcgcctgctggcggaaaccgatagcctgcgcagccgcacc
tacctgttcgaacccggcagcttccggcccttggcgctgcacgaacaacacaacacccaa
gccggtggcagcacctaccactaccacctggaccatctcggcacgcccagggagctgacc
gataccgatggcagaatcgtctggtccgcccgctaccgcgcctacggcaacctggccctc
gccgacgtcgaagccatcgacaacccgctgcgtttccaaggccagtattacgaccaagaa
actggtttgcactacaacctgaatcgatattacgatcctaatgcagggcggtttattcat
caggatccgattggcatcaaaggggggataaacatatattgttatcttgtgaatccgata
atgtcagtggaccctctcggattagcgccgcttaccggtgtagatttttccggtagcccg
gatttgttcccatcgggaactgggcagcaaagcattgtggaaataacgatgcagggttcg
agatcaagagactttgtccaggcctataaggctgcgggaataagccctgtagatgccgaa
gggtatacttggcatcacgttgatgattttaatccgtctacagggaaaaccactatgcag
ttggtgaaaactgaggctcacgaggctagttttccgcatagaggctcggtgtctcagttt
gagaagcaatatggtgttgagtatgacagtaaagagtcagtcgatatagccaacaaaaac
ggctggttgaagggccgcaaacctaaatgtggttaa
DBGET
integrated database retrieval system
