KEGG   Methylomonas sp. LW13: U737_22500
Entry
U737_22500        CDS       T05879                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
metl  Methylomonas sp. LW13
Pathway
metl03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:metl00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    U737_22500 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:metl02044]
    U737_22500 (tssM)
Secretion system [BR:metl02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   U737_22500 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical AAA_10
Other DBs
NCBI-ProteinID: QBC29465
LinkDB
Position
complement(4891213..4894761)
AA seq 1182 aa
MERIISFFKTKWVLELIGIVILSVLIWFIGPLIAIAGSVPLETDLSRVITISVIVGCWLL
YRLVAWLLSRKREQRLMADLAGGNDANDAQSASAAELDVLNRGFDEALALLKTTSAKQHG
RKQYLYELPWYAIIGAPGSGKTTALINSGLHFPLAERLGKHSVKGVSGTRDCDWWFADEA
VLLDTAGRYTTQDSHQEVDATAWHGFLQLLKKYRPRRPLNGVFVAVSVSDLIQQTEEELR
QHAAAIRRRITELNAQLGVQLPVYVLFTKVDLVAGFSDFFANLTEDERSQVWGETFIRAD
NDKEDLAAHLVQFEKAYDELTERLVQRRLKRIQEERDVQRRTAIFDFPQQMMLFKSVATG
FLDAAFATNRYEEPFLLRGVYFSSGTQEGTPIDRVMAALASSFRLERQATPLMTGRGKSY
FLTKLLKQVVFPEAELVGVDPKVERRFRLMNLAGFAATFALVAIAVVVWMVSFATNKSAI
ADVEKQVEIYRASNLVPTDSRSGFLALLPKLNALQAAKDVYAQTGWSSGFGLYQGDKIDS
AIDIAYQRLLRENFQALITLRLKERMQSDEGKNLDVLYQLLRVYLMFGEPQRMDAKVAQP
WVKLDWEQMFATDPETQAKLQLHLDNLLALNLDPAAIDNSFVDAVRNKLTQIPLVNQLYS
RFKSEALFDRSHDISVAGQLAPNGGRVFTANGKELDTLVVPGLFSSYGYTELFLKKGMVY
VKEASEQNWVLGVNGASTPIEIDRLYSDFKRLYLGDYQKTWDSVLTAVKFRPQPSNNQLV
DTLDLLSRPDSPLKLLLELVEKNTALSKLSSELADALAKSTGGALAVPEAATQKLLAMAK
QSDGGVDPVNALETYFEPYNMQVRGAADRPAPINATMASIKNLHDYLMQIGSAPNSGGQA
LSTEAARFAGGGVDPLQAAKMEFARLPGPVAASLNALTSTGGQQIKTGAKGQLNEMLKTA
VTMPCKSALAGRYPFAKNTQQDVLMADFGKVFAANGIVDQFFNANLKAFVDTAAVQWQEL
SSDKALGLSAASIRQFQIASKIRDAFFPGGGAVPQVQFELKPLALDDKVSTFRLNVEGQE
LVYRHGPEQLTKFQWPGTNNSAGVRVVFEGLDGKQVSKSKEGAWALFRMFDEFNIQPTGL
PDRFNLTVQLEGYTAKFELRAASVNNPFGISEYQSFRCPESL
NT seq 3549 nt   +upstreamnt  +downstreamnt
gtggaacggataatcagtttttttaaaacaaagtgggtgcttgaactgatcggtatcgtg
attttgtcggtactgatttggtttatcgggcctttaatcgcaattgccggcagtgtgccg
ttggagaccgatttaagccgggttataacgataagcgtcatagtcggatgttggttgctt
taccgcttggtcgcgtggctgttatcgcgcaaacgcgagcaacgtttgatggccgatttg
gctggcggcaatgatgcaaacgatgcgcaatcggcctcggcggccgagctggatgtgctg
aatcgcggtttcgatgaggctttggctttactgaaaactaccagtgcgaaacaacacggt
cggaagcagtatctttacgaattgccttggtacgccattatcggtgcgccgggctccggc
aaaaccacagcattaatcaattccggattacattttcctttggccgaacgcttgggcaag
cattcggtaaaaggcgttagtggcacgcgagattgtgattggtggttcgccgacgaagcg
gtgttattggatactgccggtcgctacaccacccaagatagccatcaagaagtggatgct
accgcctggcacggtttcttgcagctgttaaaaaaatatcgaccacgccgccctctgaac
ggggtatttgtggcggtgagtgtcagtgatttaattcagcagaccgaggaagaattacgc
caacatgccgcagcaatcaggcggcggattacggagcttaatgcgcaactgggtgtgcaa
ttgcctgtctacgtgctgttcacgaaagtggacctcgtggcgggatttagcgattttttc
gccaatttaaccgaagacgagcgtagccaggtgtggggtgagacgtttattcgtgccgac
aacgataaagaagatctggccgctcacttggtgcaattcgaaaaggcctatgacgaattg
accgagaggttggtacaacgccgtttgaagcgtatccaggaagagcgcgatgtgcagcgg
cgtacggctattttcgattttccgcaacaaatgatgctgttcaaatcggtggcaaccggg
tttctggatgccgcatttgccaccaatcgctacgaagagcctttcttgttgcgcggcgtt
tatttcagcagcggcacccaagagggtacgccgatagatagagtgatggcggcgttggcc
tcaagctttagattggaaaggcaagcaacaccgttaatgaccgggcgcggtaaaagctat
tttctgactaagcttctgaagcaagtcgtgtttcccgaagccgaattggttggcgtggat
ccaaaggtcgagcggcgttttcgtttgatgaacctcgccggcttcgccgccacctttgcg
cttgtggcgatagcggtagtggtgtggatggtcagttttgccacgaataagtcggcgatt
gccgatgtcgaaaaacaggtagaaatttaccgagccagtaatcttgttcccaccgattcg
cgctccggttttttggccttgttgcccaagcttaatgccttacaagccgccaaagacgtg
tatgcacaaaccggctggagcagcggttttggtttataccaaggcgacaaaatcgattca
gccatcgatattgcctatcagcgcttgcttcgtgaaaattttcaagccttgattacgcta
cgcttgaaagagcgtatgcaaagcgatgaaggcaaaaatctggatgtactttaccaatta
ttgcgtgtttatctgatgttcggcgagccgcaacggatggacgcaaaggttgcacagcct
tgggtgaaattggattgggagcaaatgttcgccaccgacccggagacccaagccaaatta
cagttacatctggataatttgttggctttgaatttggatccagctgctatcgataacagt
tttgtcgacgcagtgcgtaataaattgacgcaaattcctctggtcaatcaactttatagc
cgttttaaaagtgaggcgctgtttgatcgcagtcacgacatttcggttgccggacaatta
gcgccgaacggcggccgagtgtttaccgcgaacggcaaggaattggatacgttggtggta
cccggtttgtttagcagttacggttatacggagctatttctgaaaaaaggcatggtttac
gtcaaggaagccagcgaacaaaattgggtacttggcgtaaacggcgcaagtacccctatc
gaaattgatcgtttatatagcgatttcaaacgcctgtatttgggagattaccaaaagacc
tgggatagcgtgctgacggcggttaagttccgcccgcagcccagcaataatcagctggta
gatacgctggatctgctgtcgcgccccgattcgccattgaagcttttgttggagttggtc
gaaaaaaataccgcgttaagcaagctctcgtccgaattggccgatgcgttggcaaaatcc
accggcggagccttggcggttccggaggctgctacccaaaaactgctggcgatggcaaaa
caaagcgacggtggcgtcgatccggtcaatgcattggaaacttacttcgaaccttacaat
atgcaagtgcggggcgctgccgacaggcctgctccgatcaatgcgacgatggcgagtatc
aaaaatctgcacgattatctgatgcagattgggtcggcacctaatagtggcggtcaagcc
ttgtctaccgaagcggcgcgatttgccggcggcggtgttgaccctctgcaagcagccaaa
atggaatttgcccgtttgcccggtccggttgcagcctcgctgaatgcgttgaccagcacg
ggcgggcaacaaatcaaaaccggcgcgaaagggcaactcaacgaaatgttgaaaacagcg
gtgacgatgccctgcaaaagtgctttggctggccgttatccgtttgcgaaaaatactcag
caggacgtgttgatggctgatttcggcaaagtgtttgccgctaacgggattgtcgatcag
ttttttaacgctaacctcaaggcatttgtcgataccgcagcggtgcagtggcaggagctt
agttctgataaggctttaggcttatcggcagccagtattcgccagtttcagattgcatcg
aaaattcgtgacgcattttttcccggcggcggcgcggtgccgcaagtgcaattcgagtta
aaacccttggccttggacgacaaagtcagcaccttcagattaaatgtcgaaggccaggag
ttggtttaccgccacggtcctgagcaactcaccaagtttcagtggcccggcaccaataat
agtgccggggtcagagtggtgttcgaaggtttggacggcaaacaagtcagcaaatctaag
gaaggggcctgggcattgttcaggatgttcgacgaattcaacatccaacccactggcctg
ccggaccgctttaatttgaccgtacaacttgaaggttataccgcgaaatttgagttgcgc
gcggccagtgtcaataatccatttggcatcagcgaatatcaaagctttcgttgtccggag
tcactatga

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